Salmonella enterica subsp. enterica serovar Dublin: SeD_A1060
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Entry
SeD_A1060 CDS
T00757
Name
(GenBank) YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sed01002
]
SeD_A1060
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sed01011
]
SeD_A1060
Peptidases and inhibitors [BR:
sed01002
]
Cysteine peptidases
Family C82
SeD_A1060
Peptidoglycan biosynthesis and degradation proteins [BR:
sed01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SeD_A1060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ACH76541
UniProt:
A0A6C6ZZX6
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All DBs
Position
1064981..1066831
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AA seq
616 aa
AA seq
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MLLNKMCGRCLSAISLCLAVTFAPLFNAQADEPEMIPGDSAVAAPDLAGPQKQSAATAIM
AGIQPLPEGVSAEKVRADLQSQLPSGYTPVYMSQLTLLYAARDMKPMWDNRDAVKVFQQQ
LAEVAIAGFQPQFTAWVALLTDPAVNGMARDVVLSDAMMGYLHFIANIPVKGQRWLYSNK
PYALATPPVSVINQWQIALEEGQLPMFVASLAPQHPQYAPMHDALLKLVADSRPWPQLAN
TATLRPGQWSNDVPALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDEPSVAQPV
DEQTARRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVL
ALNIQRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNV
VVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWTTITPSNL
PFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELAN
MLLQDAGWNDARISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYDLT
ARSSAQIVPKVEQLIR
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaacaagatgtgtggtcgttgtctgtcggcaatcagtttatgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaaatgatacctggcgatagc
gccgttgccgcgccggatctagctgggccgcagaagcaatcagccgcgacggcgattatg
gccgggattcagccgctgccggagggcgtttcagccgagaaagtccgggctgatttacag
tcgcagcttccttccggctatacgccggtctatatgagccagctgacattgctgtatgcc
gcgcgcgacatgaagcccatgtgggataatcgcgatgcggtgaaagtcttccagcaacag
ttggcggaggtggcgattgccggattccagccgcagtttaccgcctgggtggcattgttg
accgatcccgccgtaaacggtatggcgcgcgatgttgtgttgtcagacgctatgatgggc
tatctccatttcattgcgaatatccccgtcaaaggccagcgctggttatatagcaacaaa
ccttacgcattggcgacgccgccagtctcggtgattaaccagtggcaaatcgcgctggaa
gaggggcagttgccgatgtttgtcgccagcctggcgccgcagcatccacagtatgcgccc
atgcatgacgcgctgctgaagctggtggcggactctcgcccgtggccgcagttggccaat
accgcaacgctgcgcccggggcaatggagtaacgatgtgcctgcgctgcgcgaaatatta
cagcgtacggggatgctggatggcggtccaaagatagccttacccggcgataacactgct
gatagcgccgtcgtcagcccctccgccgtggtcgacgaaccatcggtggcgcagccggtc
gacgaacaaacggcccgccgtagtaagccggctccggcggtacgcgccgcctacgataat
gaactggtcgaggcggtaaagcgttttcaggcatggcaagggctgggggcggatggcgtt
attggcccggcgacgcgtaactggcttaatatgacccccgcgcaacgcgcaggcgtactg
gcactgaatatccaacgtttacgcctgctgccggcggaactctctaccggtattatggta
aacattcccgcttattcgctggtctactatcagaatggcaaccaggtgctggcttcgagg
gtgatcgtcgggcgtcccgatcgtaaaacgccgatgatgagcagcgcgctgaataatgtg
gtggtgaacccgccgtggaacgttccgcccacgcttgcgcgtaaagacattttaccgaag
gtgtggaatgacccaggctatctggagcgccatggctacaccgtgatgcgcggctggaac
agcaaagaagcgatcgatccgtggcaggttgactggaccaccattacgccatcgaatctt
ccgttccgtttccagcaggcgccaggcgcgcacaattcgctggggcgttataaatttaat
atgccgagctctgatgcgatctatctgcacgatacgcctaaccatactctctttcagcgt
gacgccagggcgttaagttccggctgcgtgcgggtcaataaggcctctgaactggcgaat
atgctcttgcaggatgctggctggaacgatgcgcggatctcaggcgccctgaagcaaggc
gacacgcggtatgtcaatatccggcagaacattccagtaaatctttactatctgaccgcg
tttgtcggcgcagatggacgtatgcaatatcgtacagatatttacaattacgatctcaca
gcgcgatccagcgcacaaattgtgccaaaggttgaacaattaatcaggtaa
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