KEGG   Salmonella enterica subsp. enterica serovar Dublin: SeD_A1221
Entry
SeD_A1221         CDS       T00757                                 
Symbol
clpB
Name
(GenBank) chaperone protein clpB
  KO
K11907  type VI secretion system protein VasG
Organism
sed  Salmonella enterica subsp. enterica serovar Dublin
Pathway
sed03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sed00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SeD_A1221 (clpB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sed02044]
    SeD_A1221 (clpB)
Secretion system [BR:sed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SeD_A1221 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 NACHT AAA_7 TniB AAA_14 RsgA_GTPase bpMoxR Clp_N AAA_24 AAA_18 ABC_tran_CTD nSTAND1 Rad17 Sigma54_activat AAA_6 SpGH101_helical
Other DBs
NCBI-ProteinID: ACH74899
UniProt: A0A6C6ZXS4
LinkDB
Position
complement(1213728..1216463)
AA seq 911 aa
MIQIDLATLVKRLAPFAKQALEAAASECMSQQAAEITVAHVLLQMLATPRSDFRVIAERA
EIGADDLRQALTVENYATARSSDSYPSFSPMLVEWLKEAWLLASAEMQQTELRGGVLLLA
LLHSPLRYLPPAAARLLTAINRDLLRQDFAGWTKESAESVILNADGQTASAIADTGDTLL
ARYAKNMTDDARQGRLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLAL
RIIAGQVPDKLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVIQSPKPVILFIDEAH
TLIGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDSALSRRFQLVKVSEP
NAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARV
AINLSSPPRQISALTTLRQQCEAEIRQLEREIRIGLRSDTSRLNEVLAQYDETLSELDAL
EAAWRQQQTLVQEIIALRKGLLDETDATGNDETATPETEAVGSDDESVTAPPEAEPEISP
AARLAQLTAELDALHHTQLLVSPHVDKKQIASVITEWTGVPLNRLSQNEMSVITDLPQWL
GDTIKGQALAIKHLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLYGGR
QYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAHPDV
LNLFYQAFDKGEMADGEGRLIDCKNVVFFLTSNLGYQVIVEHADNPEAMQEALYPVLADF
FKPALLARMEVVPYLPLSRETLAVIIAGKLARLDNVLRARFGAEVVIEPEVTDEIMQRVT
RAENGARMLESVIDGEMLPPLSLLLLQKMAANIAIARITLGVANGAFTADVEDVPDEDTQ
PVAEAEDEAVL
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgatccagattgacttagccaccctggtaaaacggcttgctcccttcgcgaaacaggcg
ctggaagcggcggcgtcggagtgtatgagccagcaggcggcagaaattaccgtcgcgcat
gtgctgctacagatgctggcgaccccgcgcagcgactttcgggtgattgccgaacgtgcg
gagatcggcgccgatgatttacgccaggcgctgacggtggaaaattacgccaccgcccgt
tcatccgacagctacccgtcgttttccccgatgctggttgaatggctgaaagaggcctgg
ctgctggcctccgcggaaatgcagcagaccgaactgcgcggcggcgtgctgctgctcgcc
ctgctgcattcgccgttgcgctacctgccgcccgccgccgcccggttgctgaccgccatc
aaccgcgacctgctccggcaggattttgccgggtggacgaaggagtccgccgaatcggtg
atcctgaatgcggacggacagaccgccagcgccatagccgataccggcgacaccctgctg
gcccgctatgccaaaaacatgaccgacgatgcccggcaggggcggcttgatccggtgctg
tgccgcgataacgaaattgacctgatgatcgatatcctctgccgccgccgtaaaaataat
ccggtggtggtgggcgaagcgggcgtgggcaaaagcgcgctgattgaagggctggcgctg
cgcattattgccggtcaggtgccggacaaactgcgcgataccgatattatgacgctggat
ctcggcgcattacaggcgggcgcgtcggtgaaaggtgaatttgagaagcgctttaagggg
ctgatggcggaagtcattcagtcgccgaaacccgtcatcctgtttatcgacgaagcccac
acgctgattggcgcgggcaaccagcagggcgggctggatatctccaacctgctcaaaccg
gcactggcgcgcggcgagctgaaaaccatcgccgccaccacctggagcgaatacaaaaaa
tacttcgagaaagactccgccctgtcgcgccgtttccagttagtgaaagtcagcgaaccc
aatgctgccgaagccaccattattctgcgcggcctgtcggcggtgtatgagcagtcccac
ggcgtgctgattgacgatgaagccttacaggccgctgcgacgttgagcgagcgctacctg
tcaggccgccagttgccggataaggccattgatgtgctggataccgcctgcgcccgcgtg
gcgattaacctctcctcgccgccgagacaaatctcggcgctgaccaccctgcgccagcag
tgtgaagcggaaatccgccagcttgagcgtgagatccgtattggcctgcggtcggacacc
tcacggctaaacgaggttctggcgcagtatgacgaaacgctgagcgaactggatgcgctg
gaggccgcgtggcgccagcagcagacgctggtgcaggagattatcgcgctgcgtaagggg
ctgctggacgaaacggacgctaccggcaacgacgaaaccgcaacgcctgaaacagaggcg
gtgggcagtgacgatgaatccgtcacagcgccgccggaagcggaaccggaaatttcgcca
gccgcccgcctcgcgcagctcaccgccgaactggacgccctgcaccacacgcagctgctg
gtctccccacacgtcgataaaaaacagatagccagcgtgattaccgaatggaccggcgtg
ccgcttaaccgcctgtcacaaaacgaaatgtcggtcatcaccgacctgccgcagtggctg
ggcgacaccattaaaggccaggcgctggcgattaagcacctgcacaaacacctgctgacc
gcccgcgccgatctgcgccgtccgggacgcccgctcggcgcgttcctgctggccggtccc
agcggtgtcggcaaaaccgaaaccgtgctgcaactggccgaactgctctacggcggtcgc
cagtacctgaccaccatcaatatgtcggagtttcaggagaaacacaccgtttcacgcctg
attggttcgccgccgggctatgtcggctacggcgagggcggcgtgctgaccgaagcgatt
cgtcagaaaccgtactccgtggtgctgctcgacgaggtggagaaagcccacccggacgtg
ctcaacctgttctaccaggcgttcgacaagggcgagatggccgatggcgaagggcgtctt
atcgactgtaaaaatgtggtgttcttcctcacctccaacctcggctatcaggtgattgtc
gaacatgccgacaacccggaagccatgcaggaagcgctgtacccggtactggcggacttc
tttaaaccggcgctgctggcgcgtatggaagtggtgccgtacctgccgttatccagagaa
acgcttgccgtcattatcgccgggaagctggcgcggctggacaacgtactgcgcgcccgc
ttcggcgcggaggtggtgattgagccggaggtgaccgacgaaatcatgcagcgcgtcacc
cgcgccgaaaacggcgcgcggatgctggagtcggtcatcgacggcgagatgctgccgccg
ctctccctgctgctgttgcagaaaatggcggcgaatatcgccattgcccgtatcacgctg
ggcgtggcaaacggcgcgtttaccgcggatgtggaggatgtgccggatgaggatactcag
cccgtagcggaagcagaggacgaagccgttctatga

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