Salmonella enterica subsp. enterica serovar Dublin: SeD_A2437
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Entry
SeD_A2437 CDS
T00757
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Pathway
sed00521
Streptomycin biosynthesis
sed00523
Polyketide sugar unit biosynthesis
sed00525
Acarbose and validamycin biosynthesis
sed00541
Biosynthesis of various nucleotide sugars
sed01100
Metabolic pathways
sed01110
Biosynthesis of secondary metabolites
sed01250
Biosynthesis of nucleotide sugars
Module
sed_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
sed_M01025
dTDP-D-Fuc4NAc biosynthesis, Glc-1P => dTDP-D-Fuc4NAc
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SeD_A2437 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SeD_A2437 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SeD_A2437 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SeD_A2437 (rfbB)
00525 Acarbose and validamycin biosynthesis
SeD_A2437 (rfbB)
Enzymes [BR:
sed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SeD_A2437 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Gp_dh_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ACH73778
UniProt:
A0A6C6ZTW1
LinkDB
All DBs
Position
complement(2309148..2310233)
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AA seq
361 aa
AA seq
DB search
MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC
DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEVARKYWSALGE
DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA
WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA
RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH
DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGR
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatacttattactggcggggcaggttttattggatcagctgttgtccgccatatt
attaagaatacacaggacactgtagttaatattgataaattaacctacgccggtaatctt
gaatccctttctgatatttctgaaagtaatcgctacaattttgaacacgcggatatttgt
gattccgctgaaataacgcgtatttttgagcagtaccagccggacgcggtgatgcatttg
gctgcggaaagtcatgtggaccgttcgattaccgggccagcagcatttattgaaaccaat
atcgtcggcacctatgtacttcttgaagttgcgcgtaaatactggtctgcgcttggcgaa
gataaaaaaaataattttcgttttcatcatatttccactgatgaagtttacggcgattta
ccgcatcctgatgaagttgaaaacagcgttacgctgccgttatttactgaaacgacggca
tatgcgccaagtagcccctattctgcgtcaaaagcatccagcgatcatttagtccgtgcc
tggcggcgtacctatggtctaccaacgatcgttaccaattgttctaataactatggccct
tatcacttccctgaaaaactgattccgttggtcattttgaacgcactggaaggaaagcct
ttgccaatttatggcaaaggggatcagattcgcgattggctatatgtagaagatcatgct
cgcgcgcttcatatggtagtgactgaaggcaaggcgggggagacttataacattggtggc
cacaatgagaagaaaaatctcgatgtggtatttaccatctgtgatctgctggacgagatt
gtacccaaagcgacttcttatcgtgaacaaatcacttatgtcgcggatcgtccgggccat
gatcgtcgttatgccattgatgcaggtaaaattagccgcgaattaggctggaaaccgctg
gagacctttgaaagcggtattcgtaaaacagtggaatggtaccttgcaaatactcaatgg
gtaaacaatgttaaaagtggggcgtatcagagttggatagaacagaactatgaaggacgc
cagtaa
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