Salmonella enterica subsp. enterica serovar Dublin: SeD_A3238
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Entry
SeD_A3238 CDS
T00757
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sed03016
]
SeD_A3238 (truD)
Enzymes [BR:
sed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SeD_A3238 (truD)
Transfer RNA biogenesis [BR:
sed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SeD_A3238 (truD)
Prokaryotic type
SeD_A3238 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACH77589
UniProt:
B5FTS3
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All DBs
Position
complement(3113710..3114759)
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AA seq
349 aa
AA seq
DB search
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRK
LRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEE
LPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtttgacaatctcacctggctgcacggaaaaccacaaggtagcggattgctg
aaagcgaatccggaagattttgtggtggttgaagatttaggctttacgccagatggtgaa
ggcgagcacattctgctgcgtattttgaaaaacggttgcaatacccgttttgtcgctgac
gcgctggcgaaattcctgaaaattcacgctcgcgaagtgagctttgccgggcaaaaagat
aaacacgccgttaccgagcagtggctgtgcgcgcgcgtgccggggaaagagatgcccgat
ttcagcgcctttcagctggaaggttgtaaagtgctggaatacgcgcgtcacaagcgtaag
ctgcgtttaggcgcgctgaaaggcaatgcctttacgctggtgttgcgtgaaataagcgat
cgccgcgatgtcgaaacacgattgcaggcgattcgcgatggcggcgtgccgaactatttc
ggcgcacagcgattcggcattggcggcagcaacttgcagggcgcgctgcgctgggcgcaa
agtaacgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcgcgtagc
gcgttgtttaatcaaattgttcaccagcggctgaagaaaccagactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgtggaagctggttcgtcgcgacatctgaagaa
ctgcctgaattgcagcgccgggtagacgaaaaagagctaatgattacagcgtcgttgccg
ggcagcggagagtggggaacacagcgtgcggcgctggcgtttgagcaagatgccattgcc
caggaaacggtgttgcaatcgctgttgctgcgcgaaaaagtagaggcgtcgcgcagagcg
atgctgctttatccgcaacaattaagctggaactggtgggatgacgttaccgtcgagtta
cgtttctggctgcccgcaggcagttttgccaccagcgtagtaagggaactgatcaacaca
atgggtgattatgcgcatattgctgagtaa
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integrated database retrieval system
