Salmonella enterica subsp. enterica serovar Dublin: SeD_A3304
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Entry
SeD_A3304 CDS
T00757
Name
(GenBank) L-fucose operon activator
KO
K02430
DeoR family transcriptional regulator, L-fucose operon activator
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sed03000
]
SeD_A3304
Transcription factors [BR:
sed03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SeD_A3304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_Mga
GntR
HTH_Crp_2
TrmB
Mga
HTH_PafC
Sigma70_r4
HTH_20
DUF1670
HTH_24
Rrf2
HTH_9
HTH_36
Put_DNA-bind_N
Arg_repressor
HTH_Tnp_ISL3
MarR
Fe_dep_repress
z-alpha
PCI
YMF19_C
HTH_23
HTH_32
HTH_17
MarR_2
HTH_69
Motif
Other DBs
NCBI-ProteinID:
ACH77038
UniProt:
A0A6C7A1T1
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All DBs
Position
3179743..3180453
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AA seq
236 aa
AA seq
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MKAARQQAIVDLLINHKSLTTEALATRLNVSKETIRRDLSELQTQGKVLRNHGRAKYIHR
ENQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMTIALDASSTCWYLARQLPDIPIQVF
TNSHPICQELGKRERITLISSGGQLERKYGCYVNPSLISQLKSLDIDLFIFSCEGIDGGG
DLWDSNAINADFKSILLRRASQALLLIDKSKFNRSGEARIGHLDDVTHIVSDAPQS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcggcacgccaacaagcgatagtcgatctgctgatcaatcataaaagtctgacc
accgaagcgctggccacccggcttaacgtcagtaaagagaccatccgccgcgatctcagt
gaactacagacgcagggaaaagtgctgcgtaatcacggacgagctaaatatattcatcgt
gaaaatcaggacagcggcgatccattccatatccgcctgaaaagccattatgcgcacaaa
gccgatattgcccgtgaagcgttagcgtggatagaagaaggaatgacgattgcgctggat
gccagttcaacctgctggtatctggcccgccagttgccggatattcccattcaggttttt
accaatagccatcctatctgtcaggagctgggaaaacgcgaacgcattacgctgataagt
tccggcggccagcttgaacgtaaatatggctgttatgttaatccgtcgcttatctcacag
ctaaaatcgcttgatatcgatctgttcatcttttcctgtgaggggatcgacggcggcggc
gatctgtgggactccaatgcgatcaacgccgattttaaatctatcctgctcaggcgtgcc
tcgcaggctttattattgattgataaaagtaaatttaatcgttcaggagaggcgcgcatc
ggccatctggatgacgtgacgcatattgtttcagatgcgccgcagtcatag
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