Salmonella enterica subsp. enterica serovar Dublin: SeD_A3641
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Entry
SeD_A3641 CDS
T00757
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sed03016
]
SeD_A3641 (truB)
Enzymes [BR:
sed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SeD_A3641 (truB)
Transfer RNA biogenesis [BR:
sed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SeD_A3641 (truB)
Prokaryotic type
SeD_A3641 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACH75485
UniProt:
A0A6C6ZYC4
LinkDB
All DBs
Position
complement(3493171..3494115)
Genome browser
AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVTYLRRLTVSKYPIERMVTLEHLQTLVAQAEQQGVPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGVPLKGLVRVTEGEDDKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggccgcgacattcacggcgttctgctgctggacaagccg
cagggtatgtccagcaatgacgtgctgcaaaaagttaagcgcatctacaatgccaaccgc
gccgggcataccggcgcgctggacccgctggcgaccggcatgttgccgatttgcctcggc
gaagcgacaaaattttcgcagtacctgctggattctgacaaacgctatcgtgttattgcc
cgtctggggcagcgcacggatacctctgacgccgatggtcaaatcgtgcaggagcgtccg
gtgactttcagcgctgagcagcttgcgagcgcgctggagacctttcgtggggatatcgaa
cagattccctcgatgtattcggcgctgaagtatcagggcaagaagctgtacgaatatgcc
cggcagggtatcgaagtgccgcgcgaagcccgcccgattaccgtctatgagctgctattt
attcgccatgaaggtaacgagctggagctggaagttcactgctccaaaggcacctatatt
cgtaccattattgatgatttaggtgagaaactgggctgtggcgcgcacgtaacgtacctg
cgtcgtctgacggtcagcaagtatccgattgagcgaatggtgacgctggagcatttgcag
acgctggtagcacaggcggaacagcagggcgttccggcggcgcagttgctcgatccatta
ttgatgccaatggatagtccggcttcggactatcctgttgttaatctgccgttaacatct
tcggtatatttcaaaaatggcaacccggttcgtaccacgggcgtgccgttgaagggactg
gttcgtgtgacggaaggtgaagacgataaatttatcggtatgggcgaaattgacgacgaa
ggccgtgtcgcgcctcgtcggctggtagtagagtacccggcgtaa
DBGET
integrated database retrieval system
