Salmonella enterica subsp. enterica serovar Dublin: SeD_A4508
Help
Entry
SeD_A4508 CDS
T00757
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Pathway
sed00260
Glycine, serine and threonine metabolism
sed00460
Cyanoamino acid metabolism
sed00630
Glyoxylate and dicarboxylate metabolism
sed00670
One carbon pool by folate
sed00680
Methane metabolism
sed01100
Metabolic pathways
sed01110
Biosynthesis of secondary metabolites
sed01120
Microbial metabolism in diverse environments
sed01200
Carbon metabolism
sed01230
Biosynthesis of amino acids
sed01240
Biosynthesis of cofactors
sed04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SeD_A4508 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SeD_A4508 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SeD_A4508 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SeD_A4508 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SeD_A4508 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SeD_A4508 (glyA)
Enzymes [BR:
sed01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SeD_A4508 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
ACH77016
UniProt:
A0A6C7A1F2
LinkDB
All DBs
Position
4345555..4346793
Genome browser
AA seq
412 aa
AA seq
DB search
MINNDPLFDLLNKEQQRQQHSLELIASENFASPAVLAAQESVLTNKYAEGYYQHRYYGGC
KFIDEVEMLAITRAQQLFGARYVNVQPHSGSQANQAVYLALLKPGDKILGMSLQCGGHLT
HGSPVNQSGKWFNAFHYGVDAHSGLIDMDEVETIAKRERPRLIIAGGSAYPRHYDFARFR
RIADAVGAILLVDMAHFAGLVAGGCFPSPLAYADVITTTTHKTLRGPRGGMILANDARLA
KKIDSAIFPGLQGGPLMHVIAAKAVALGEALQPEFKRYAGQVIENAQAMCQQLAQRGLTL
LTGGTDCHLGIIDLRPQGLTGAQVEYFLELAGITVNKNTLPGDPQPPSITSGIRIGSAAC
ATRGMNADDFTLIADWISEIIFAIKTPNITDICADIRQKVTKLTTNYPLPYQ
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaacgatccgctttttgatctgcttaacaaagagcaacagcgccagcagcac
tcgctggaactgattgcctcggagaatttcgccagccctgccgttcttgcggcacaagag
tcggtgttaaccaataaatacgccgaaggctattaccagcaccgctactacggcggctgt
aagttcattgatgaggttgagatgctggcgataacccgcgcgcagcaacttttcggcgcg
cgttacgttaacgtgcagcctcactccggcagccaggcgaatcaggcggtatatctggcg
ctgctgaaacccggcgacaaaattctgggcatgagcctgcaatgcggcggccatctcact
cacggttcgccggtcaatcaatccggtaaatggtttaacgcctttcattatggcgtcgat
gcgcatagcggtcttattgatatggatgaggttgagacgatcgcgaagcgtgagcgcccg
cggctgattatcgccgggggatcggcctacccacgacactatgattttgcccgctttcgc
cgcattgccgatgccgtcggcgcgatactgctggtggatatggcgcattttgccgggctg
gtggcgggcggctgtttcccctcgccgctggcgtatgccgatgtgattaccaccaccacg
cataaaacgttgcgcgggccgcgtggcggcatgattctggccaacgacgcccggctggcg
aaaaaaatcgacagcgccatctttcccggcttgcagggcgggccgttgatgcacgttatc
gcggctaaagcggtggcgcttggcgaagcgctacagcctgaatttaaacgttacgccggg
caggtaatcgaaaatgcgcaagcgatgtgtcagcaactggcgcagcgcggcctgacgctg
ttaacgggcggtaccgactgccatctgggcattatcgacctgcgcccgcaggggttaacc
ggcgcccaggtggaatactttctcgaactggcggggatcacggtcaataaaaacacgctg
ccaggcgatccgcagccgccgtcgattacctccgggattcgcattggcagcgcagcctgc
gccacccgcggaatgaatgccgatgattttacgctgatcgcggactggatcagtgaaatt
atttttgccatcaagacgccgaatattacagatatttgcgccgatattcggcaaaaagtg
actaaattaaccaccaactatccgttgccttaccaatga
DBGET
integrated database retrieval system
