Salmonella enterica subsp. enterica serovar Dublin: SeD_A4570
Help
Entry
SeD_A4570 CDS
T00757
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sed
Salmonella enterica subsp. enterica serovar Dublin
Pathway
sed00730
Thiamine metabolism
sed01100
Metabolic pathways
sed01240
Biosynthesis of cofactors
Module
sed_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
sed00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SeD_A4570 (thiC)
Enzymes [BR:
sed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
SeD_A4570 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACH75996
UniProt:
B5FQK9
LinkDB
All DBs
Position
complement(4410927..4412822)
Genome browser
AA seq
631 aa
AA seq
DB search
MSTTTLTRREQRAKAQHFIDTLEGTAFPNSKRIYVTGSQHDIRVPMREIQLSPTLIGGSK
DNPQFEENEAVPVYDTSGPYGDPEVAINVQQGLAKLRQPWIDARNDSEELDDRSSAYTRE
RLADDGLDDLRFTGLLTPKRAKAGKRVTQLHYARQGIVTPEMEFIAIRENMGRERIRSEV
LRHQHPGMNFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA
KWCLSHHKENFLFEHFREICEICAAYDVSLSLGDGLRPGSIQDANDEAQFSELHTLGELT
KIAWEYDVQVMIEGPGHVPMHMIQRNMTEELESCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQGVRDY
AAAQAIEVGMADMSENFRAKGGEIYLKREEA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaacaacgttaacccgccgcgagcagcgcgctaaagcccagcattttatcgat
acgctggaaggcaccgcgtttcccaactcgaaacgcatctacgtgaccggttcgcagcat
gatattcgcgtaccgatgcgcgaaattcaacttagccccacgctcatcggcggcagtaaa
gacaacccgcagtttgaagagaacgaagccgtaccggtatacgacacctccggcccctat
ggcgatcctgaggtggcgattaacgtccagcagggtctggcgaaactgcgccagccatgg
attgacgcacgtaacgatagcgaagaattagacgaccgtagctcggcttataccagagaa
cgtctggccgacgatggcctggacgatctgcgttttaccggcctactgacgccaaaacgc
gctaaagcgggcaagcgcgtcacccagttacactacgcccgccaggggatcgtcactccc
gaaatggagttcatcgccatccgtgaaaatatgggccgtgagcgcattcgcagcgaagtg
ctgcgccaccagcatccggggatgaactttggcgcgcgcctgccggaaaacatcaccccg
gaattcgtgcgtgatgaagtcgccgcgggccgcgcgattattcccgccaacatcaaccac
ccggaatcggagccgatgattatcggccgcaacttcctggtgaaggtcaacgctaatatc
ggtaactcggcggtcacctcctccatcgaagaagaggtggaaaaactggtgtggtcaacc
cgctggggcgcggatacggttatggacctctccaccggccgctatatccacgaaacccgc
gaatggatcctgcgtaacagcccggtaccgatcggcaccgtcccgatctaccaggcgctg
gaaaaggtcaacgggatcgccgaagatcttacctgggaagcgttccgcgacacgctgctg
gagcaggccgaacagggcgtcgactacttcaccatccacgccggcgtgctgctgcgctac
gtgccgatgaccgccaaacgcctgaccggtattgtctcgcgcggcggttcgatcatggcg
aagtggtgtctctcccatcacaaagagaacttcctgttcgaacatttccgcgagatctgc
gaaatctgcgccgcctacgacgtttccctgtcgttgggcgacggcctgcgccccggctcc
attcaggacgccaacgacgaagcgcagttctccgagctgcatacgctgggcgagctgacc
aaaatcgcctgggaatacgacgtgcaggtgatgattgaaggcccgggtcatgtacccatg
catatgattcagcgcaacatgaccgaagagctggagagctgccatgaagcaccgttctac
accttagggccattgactaccgatatcgcgccgggctatgaccacttcacctccgggatc
ggtgccgcgatgatcggctggtttggctgcgcgatgctgtgttatgtgacgccgaaagag
catctcggcctgccgaacaaagaagatgtgaagcaggggctaatcacctacaaaatcgcc
gcccacgccgcggatttagccaaaggacatccgggcgcgcagatccgcgataacgccatg
tcgaaagcgcgcttcgaattccgctgggaagatcagtttaacctcgcgctcgacccgttc
accgcccgcgcttatcacgatgaaaccctgccgcaggagtccggcaaagtcgcccacttc
tgttccatgtgcgggccgaaattctgctcgatgaaaatcagccagggggtccgcgactac
gccgccgcgcaagccattgaagtcggcatggcggatatgtcggagaacttccgcgccaaa
ggcggcgaaatttatctcaaacgggaggaagcctga
DBGET
integrated database retrieval system
