Staphylococcus edaphicus: MNY58_06090
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Entry
MNY58_06090 CDS
T09108
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
seda
Staphylococcus edaphicus
Pathway
seda03030
DNA replication
seda03430
Mismatch repair
seda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MNY58_06090
03430 Mismatch repair
MNY58_06090
03440 Homologous recombination
MNY58_06090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seda03032
]
MNY58_06090
03400 DNA repair and recombination proteins [BR:
seda03400
]
MNY58_06090
Enzymes [BR:
seda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MNY58_06090
DNA replication proteins [BR:
seda03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MNY58_06090
DNA repair and recombination proteins [BR:
seda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MNY58_06090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
HROB
Motif
Other DBs
NCBI-ProteinID:
UQW82618
LinkDB
All DBs
Position
1250575..1253778
Genome browser
AA seq
1067 aa
AA seq
DB search
MVAHLNIHTTYDLLNSSIRIKEVVAKAAKEGYSALAITDTNVLYGLPQFYDACIAANIHP
IFGMTIHVTDGLTEVETIVLAQDNSGIKDLFKLSSAIKMKEKSETPIEWLKRYSSHLIVI
FKHVTETHKSIISGFLNHNHTFVNHTSEVTFDLPMVWAQSTRYLNPQDSDTLSAMAAIKD
NSKLDLVSEQPDYDEHLYTSEELENLSLSDTVLEQTYRIEQLCQAEISYHQSLLPKYKTP
NQQQSNDYLWQLLEKELQRLNLTEDKNNIYQKRLVHEYQVITRMGFEDYFLIVSDLIQYA
KNNDVLVGPGRGSAAGSLVSYLLNITTIDPIAYNLLFERFLNPERVTMPDIDIDFEDTHR
DKVIQYVQEKYGENHVAGIVTFGHLLARAVARDVGRIMGFDEVTLNEISKLIPHKLGITL
DEAYTLDAFKQFVHRNHRHERWFEICKKLEGLPRHTSTHAAGIIINDHPLYEYAPLTLGD
TGLLTQWTMTEAERIGLLKIDFLGLRNLSIIHQIVKQVKHDLNIDIDIEQIPFNDKKVFQ
LLSQGDTTGIFQLESDGIRNVLKRLQPEHFEDIVAVTSLYRPGPMEEIPTYISRRHNPDK
VQYLHPDLEPILKTTYGVIIYQEQIMQIASKFANFNYGEADILRRAMSKKNRAVLESERQ
HFVNGALKNGYSEQLSKQIFDLILKFADYGFARAHAVSYSKIAYIMGYLKVHFPNYFYAN
ILSNSIGSEKKTAQMIDEAKHQNINILPPNINHSHWFYKATKKGIYLSIGAIKGIGYQSV
KLIVEERKTNGAFKDFFDFTRRIPKRIKSRKLIESLILVGAFDTFGKNRATLLQSIDQVL
DDISDIEQDGFIFDVLTPKATYEEKDELPDKVLSEYEKEYLGFYVSTHPVEKAFEQKQYL
GIYKLANAQDNKPIFVQMDNMKRIRTKNGQNMAFVTLNDGVDNLDGVLFPDTFKKYETEL
NTSQMLVVRGKFENRNNKQQLILNQIDSIDKFEKTKFEQAEQIVIRKLDDESTMHPFLTE
ENVRDQIPVQYFNERQNNIKTIGYVTRDNELLSELIQRFSPWDIRII
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcatttaaacattcatacgacgtacgatttactaaattcaagtattagaatt
aaagaagttgttgcgaaagctgcaaaagaaggatattcagcacttgcaattacagatacg
aatgttttgtatggacttccacaattctatgacgcgtgtattgctgcaaatatccatcca
atctttggtatgacgattcatgttactgatggtttaacggaggttgaaactatcgtatta
gcacaagataattctgggataaaagatttattcaaattatcttcagcaataaagatgaaa
gaaaagtcagagacaccaatagagtggttaaaaagatattcaagtcatcttatagtcatt
tttaaacatgttacagaaactcataaatcaatcatttctggttttttaaatcataatcat
acatttgtgaatcatacgagtgaagttacctttgatttaccaatggtttgggcacaaagt
acacgttaccttaatccacaagattcagatacgctttctgcaatggctgctattaaagac
aatagtaagttagatttagtgagtgaacaacctgactatgatgaacatttatataccagt
gaagaattagaaaatttatcattaagtgatacagttttagaacaaacatatcgcattgag
cagctttgtcaggcggaaataagttatcatcaatctctgctaccaaaatataaaacgcca
aaccaacagcaatccaacgattacttatggcaattattagagaaagaacttcagcgatta
aatttaactgaagataagaataatatatatcaaaagcgtttagtacatgagtatcaagtt
atcactagaatgggcttcgaagattatttcttaatagttagtgatttaattcaatatgcg
aaaaacaatgatgtattagtggggccaggacgtggttctgctgctggttcgctcgttagt
tacttactaaacattacgacgattgacccgattgcgtataatttattatttgagcgtttc
ttaaacccagaacgggtcactatgccggatatagatattgattttgaagatacgcatcga
gataaagttatccagtatgtccaagaaaaatatggtgaaaatcatgtcgcaggtattgtt
acctttggtcatcttcttgcaagggcggtggctagagatgttggtaggataatgggcttc
gatgaagttacattaaatgaaatttctaaattaatcccccataagcttggcattacattg
gacgaagcctatacgcttgatgcatttaaacaatttgttcaccgtaatcatagacatgaa
cgatggtttgaaatatgtaagaagttagagggattgccaagacatacttcaacacatgca
gcaggtatcattatcaatgatcatcctctttatgaatatgcaccattgacgcttggtgat
acaggtctgttaacgcaatggacaatgactgaggcagaaagaatcggtctgttgaaaatt
gattttctaggtttgcgtaatctttcgattattcatcaaattgtgaaacaagtaaaacat
gatttaaatattgacatagatatagaacaaataccttttaacgataaaaaggtatttcaa
ttattatcacagggggatacaacaggtatcttccaattagagtctgatggtattaggaat
gtactgaaacgattacagcctgagcatttcgaagatatagtagcggtaacatcactatat
agaccaggaccaatggaagaaattccaacctatatatcaagacgtcataatcctgataaa
gtacaatatcttcatcccgatttagaacccattttaaaaacgacatatggtgtcattatt
tatcaagaacaaataatgcaaattgcgagtaaattcgccaactttaattatggtgaagcg
gatatcttaagacgtgcaatgagtaaaaagaatagagcggttttagaaagcgaacgtcaa
cattttgtgaatggcgccttaaaaaatggttatagtgagcaattaagtaaacaaattttt
gatttgattttaaaatttgcagattatggatttgctcgtgcgcatgctgttagttattcg
aagatagcgtatatcatgggttacttaaaagttcatttccctaattatttttatgctaat
attttaagtaattcaatcggaagtgaaaagaaaaccgcacagatgattgatgaggcaaag
caccagaatattaacattttgccacctaatataaatcatagtcattggttttataaagct
acaaaaaaaggcatttatctatcaattggtgccataaaaggaatcggttatcaaagcgtt
aagctaattgtggaagaacgaaaaactaacggcgcatttaaagacttttttgattttact
cgccgtatcccgaaaaggataaaatctagaaaattaatagaatcacttattttagttggc
gcatttgatactttcggcaaaaatagagcgacgctattacaatctatagatcaagtctta
gatgatatttcagatatagagcaagatggcttcatatttgatgtgctcacacctaaagct
acttatgaagaaaaggacgaactgccagataaagtacttagtgaatatgaaaaagaatat
ttagggttttatgtatccacacatccggtggaaaaagcgtttgagcaaaaacaatatcta
ggtatatataaacttgcaaacgcccaagataataaacctatttttgttcaaatggataat
atgaaacgtattagaacgaaaaacggacaaaatatggcgttcgttaccctaaacgatggt
gttgacaatttggatggtgtactattcccagatacattcaaaaaatatgaaactgagtta
aatacatctcaaatgctagtcgtaaggggtaagtttgaaaatagaaataataagcagcaa
ctgattttgaatcaaatagattcaatagataagtttgaaaaaacgaagtttgaacaagcg
gaacagattgttattagaaaactagatgatgaatcaacgatgcatccatttttaactgaa
gaaaatgtacgtgatcaaataccagtacaatattttaatgaacgtcaaaataacataaaa
acgattggctatgttacacgggataatgaattgttaagtgaactgattcaaaggttttca
ccatgggatataagaattatttaa
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