Staphylococcus edaphicus: MNY58_06735
Help
Entry
MNY58_06735 CDS
T09108
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
seda
Staphylococcus edaphicus
Pathway
seda02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MNY58_06735 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seda03021
]
MNY58_06735 (rpoD)
Transcription machinery [BR:
seda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MNY58_06735 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
UQW80311
UniProt:
A0A2C6WPM2
LinkDB
All DBs
Position
1387144..1388250
Genome browser
AA seq
368 aa
AA seq
DB search
MSGNKVKVKKQTIDPSLTLEDVKKQLVEKGKKEGHLSHEEIAEKLQNFEMDSDQMDELFD
QLTDNDISLVNEKDSSDQDSKLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLNAQEEIEL
AKRIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaataaagttaaagttaaaaagcaaacgattgatccatctctaactttagaa
gatgtaaaaaaacaattggttgaaaaaggtaaaaaagaaggacacttaagtcatgaagaa
atagcagaaaaactgcaaaattttgaaatggactctgatcaaatggatgaactattcgat
caattaactgataatgatataagtttagttaacgaaaaagatagttcagatcaagactca
aaattgaaccctaatgatttaagtgcacctccaggcgtaaaaataaatgatccagtgcgt
atgtatttgaaagaaatcggacgtgttaatttattaaacgctcaagaagaaattgaatta
gcaaagagaattgagcaaggtgatgaaattgctaagtcgcgtttagcggaagctaactta
cgtcttgtcgtaagtattgctaaaagatatgtgggtcgtggtatgcttttcctagatctt
attcaagaaggaaatatggggttaattaaagcagtagaaaaattcgactttaataaagga
tttaaattctcgacttatgcaacttggtggattcgccaagcaatcacacgtgcaattgct
gaccaagcacgtacaattcgtatcccagtgcatatggtagaaacaattaataaattaata
cgtgtgcaaagacaattattacaagatttaggtagagatcctgctcctgaagaaattggg
gaagaaatggacttaccacctgaaaaagtaagagaaatcttgaaaattgctcaagaacca
gtgtcactcgaaacaccaatcggggaagaagatgacagccatctaggtgattttattgag
gatcaagaagcacaaagtccttctgatcacgctgcatatgaattattaaaagagcaatta
gaagatgtattggatacattaactgatcgagaagaaaatgtattacgcttgcgctttgga
ttagatgacggtcgtactcgtactttagaagaagtaggtaaagtatttggtgttacaaga
gaacgtatccgtcaaatagaagcaaaagcacttagaaaattaagacacccaagtagaagt
aaacgtctaaaagactttatggactaa
DBGET
integrated database retrieval system
