KEGG   Staphylococcus edaphicus: MNY58_06945
Entry
MNY58_06945       CDS       T09108                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
seda  Staphylococcus edaphicus
Pathway
seda00010  Glycolysis / Gluconeogenesis
seda00020  Citrate cycle (TCA cycle)
seda00260  Glycine, serine and threonine metabolism
seda00280  Valine, leucine and isoleucine degradation
seda00310  Lysine degradation
seda00380  Tryptophan metabolism
seda00620  Pyruvate metabolism
seda00630  Glyoxylate and dicarboxylate metabolism
seda00640  Propanoate metabolism
seda00670  One carbon pool by folate
seda00785  Lipoic acid metabolism
seda01100  Metabolic pathways
seda01110  Biosynthesis of secondary metabolites
seda01120  Microbial metabolism in diverse environments
seda01200  Carbon metabolism
seda01210  2-Oxocarboxylic acid metabolism
seda01240  Biosynthesis of cofactors
Module
seda_M00009  Citrate cycle (TCA cycle, Krebs cycle)
seda_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
seda_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
seda_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:seda00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MNY58_06945 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MNY58_06945 (lpdA)
   00620 Pyruvate metabolism
    MNY58_06945 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MNY58_06945 (lpdA)
   00640 Propanoate metabolism
    MNY58_06945 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MNY58_06945 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MNY58_06945 (lpdA)
   00310 Lysine degradation
    MNY58_06945 (lpdA)
   00380 Tryptophan metabolism
    MNY58_06945 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MNY58_06945 (lpdA)
   00670 One carbon pool by folate
    MNY58_06945 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:seda04147]
    MNY58_06945 (lpdA)
Enzymes [BR:seda01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MNY58_06945 (lpdA)
Exosome [BR:seda04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MNY58_06945 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox HI0933_like DAO GIDA Pyr_redox_3 NAD_binding_8 FAD_oxidored AlaDh_PNT_C FAD_binding_2 Lycopene_cycl FAD_binding_3 3HCDH_N Thi4 Trp_halogenase 2-Hacid_dh_C TrkA_N NAD_binding_7 Lys_Orn_oxgnase XdhC_C
Other DBs
NCBI-ProteinID: UQW80352
LinkDB
Position
1425464..1426885
AA seq 473 aa
MSEEKYDLVILGGGTAGYVSAIRASQLGKKVALVEQSLLGGTCLHKGCIPTKALLKSAEV
MRTISNATDYGVDVEDFKLNYSRIKSRKNDIVKQMFNGVTQLMEHNKIDVFNGTGRILGP
SIFSPQSGTISVEFENGESELIPNNNVLIATGSQPMPLPFLPFDHDIVLSSDDILKLEML
PKSLVIIGGGVIGLEFASLLTDFGVKVTVIEAGERILPTESKSIANTLKNDLTQRGVKFH
ENTQLSESQISIDDSGINILLNDETTHFEKCLVAIGRKPNTDDIGLNNTKIQLSAANHII
VNEFQQTEDKHIYAAGDCIGKLQLAHVGSKEGTTAIEHMFDEAPLPLNYDKMPKCVYTQP
EIASIGQNLEQAKSNNVNAKAFKVPFKAIGKAVIENVTNQNGFCEIVINQDNDTVLGLNM
IGPHVTELINEVSLMQFMNGSTLELGLTTHAHPSLSEVLMELGLKVENRSIHV
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgtcagaagaaaaatatgatttagtaatacttggtggaggtactgcaggttatgtatct
gcaatcagagcctcacaattaggtaaaaaagttgcactcgtagaacaatctctcttaggt
ggtacttgtttacataaagggtgtataccgacaaaagctttattaaaatcggcagaagtt
atgcggacaatttcaaacgctactgactatggtgttgatgtagaagactttaagcttaat
tattcacgcataaaatcaagaaaaaacgatatcgtaaaacaaatgtttaacggtgtcact
caattaatggaacataataaaattgatgtctttaatggaactgggcgtattttaggacct
tctatattttctccacaaagcggtacaatatctgtggaatttgaaaatggcgaatccgaa
cttataccaaataataatgttcttattgcaactggatcacaaccaatgcctttacctttt
ttaccatttgatcatgatattgttctttctagtgacgacatcttaaaattagaaatgtta
ccaaaatcacttgttatcattggtggaggagtcataggtttagaatttgcatctttactg
acagattttggggttaaagtaacggtcatcgaagcaggtgaacgcatcttaccgactgaa
agtaaatctatcgcaaatacattaaaaaatgatttaacacaacgtggtgtgaaatttcat
gaaaatacacaactatcggaatcacaaatttcaattgatgactctggtatcaatatttta
ttgaatgatgaaacgactcattttgaaaaatgcttagtcgcaattggtagaaagccaaat
acggatgatattggtttaaataatacgaaaatacaattatcagctgctaatcatataatt
gtaaatgaatttcaacaaacagaagacaaacatatatatgctgcaggcgattgtatcggc
aaattacaactcgcacacgttggttcaaaagagggcactactgctattgaacacatgttt
gatgaagcacctttaccattgaattatgataaaatgccaaaatgtgtttatacgcaacct
gaaatagctagtattgggcaaaatttagaacaagcaaaatctaataacgttaatgcaaaa
gcctttaaagttccgtttaaagcaatcggcaaagctgttatagaaaatgttacaaatcaa
aatggcttttgcgaaatcgtaatcaatcaggataatgatactgtacttggtcttaatatg
attggaccacatgtaacagaattaattaatgaagtatcattaatgcaatttatgaatggc
tccactctagaacttggattaactactcatgcacatccgtcgctgtccgaagtgttaatg
gagttaggcttaaaagttgaaaacagatcgattcatgtttaa

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