Staphylococcus edaphicus: MNY58_08160
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Entry
MNY58_08160 CDS
T09108
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
seda
Staphylococcus edaphicus
Pathway
seda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNY58_08160 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seda03019
]
MNY58_08160 (rny)
Messenger RNA biogenesis [BR:
seda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MNY58_08160 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
VTT_dom
Motif
Other DBs
NCBI-ProteinID:
UQW80571
LinkDB
All DBs
Position
complement(1682590..1684149)
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AA seq
519 aa
AA seq
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MNLLGLLLILLGIILGVVVGYMIARNLLHQKQLQARQTAEDIIEQGNKEAENIKKEKLLE
AKEENQIIKEQSENELRERRGDLQRQEARLLQKEENLERKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLINKHEQELERISGLTQAEAAQEQLQRVEDELSQDIAILVKEKEKE
AKEAVDKNAKELLATTVQRLAAEHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVDKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLQYRTSYGQNVLKHSIEVAHLSGMLAAELGEDITLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYAENETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSEGYEGVEKAFAIQAGREIRVIVSPDTIDD
LKSHRLARDIKSQIEDELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaggcctcctactcattttgctaggtattattctcggagttgttgtaggg
tacatgattgcccgaaatttattgcatcaaaagcaattacaagcaagacaaactgccgaa
gatattatcgaacaaggtaataaagaagcagagaatatcaagaaggaaaagcttctagaa
gctaaagaagaaaatcaaatcataaaagaacaaagtgaaaatgaacttcgtgaaagacgt
ggtgatcttcaaaggcaggaagcaagacttctacaaaaagaagaaaacttagagcgaaaa
tctgatctattagacaaaaaagatgagattttagagcaaaaagagtctaaacttgaagaa
cgacaacaacaagtagatgcaaaagagagtagtgttcaaacattaataaataagcatgaa
caagaattagaacgcatctctggtctcactcaagctgaagccgcacaagagcaacttcaa
agagttgaagatgaattgtcacaagatattgcaatacttgttaaggaaaaagagaaagaa
gcaaaagaagcagtcgataaaaatgcaaaagaactattagcaactactgttcaaagatta
gcggcagaacatacttctgaatctacagtatcggttgttaatttaccgaatgacgaaatg
aaaggtcgaatcattggtagagaaggtagaaatatcagaacgttagaaacgttaactggt
attgacttaattatagatgatacaccggaagcagtaatcctttctggttttgacccaatt
agacgtgaaattgcaagaactgcattagtaaatcttgtttcggatggtcgcatccatcca
ggacgaattgaagatatggtagataaagctcgaaaagaagtagacgatattattagagat
gcaggggaacaagctacatttgaaattaatgtgcataatatgcatccagatttagttaaa
atcttaggtcgtttacagtatcgtactagctatggacaaaatgtattgaaacattctatt
gaagttgcccacttaagtggtatgttagcggctgaattaggtgaagatataacattagct
aaacgtgctggcttacttcatgatgttggtaaagcaattgatcatgaagtagaaggaagc
catgttgaaataggtgtagaattagcaaaaaaatatgctgaaaatgaaacggtaattaat
gctattcattcccatcatggtgatgttgaaccaacttcaattatttctatcttagttgca
gcagcagatgctctatcagctgcaagacctggtgctcgtaaagagacattagagaattat
attagaagattggaaagactagaaacactttcagaaggttacgaaggtgttgaaaaagca
tttgcaatccaagcaggcagagaaattcgagttattgtatcaccagatactatcgacgac
ttaaaatcacatcgcttagcaagagatattaagagccaaattgaagatgaacttcaatat
cctggtcacataaaagtgacagttgttcgtgagactagagcaattgaatatgcaaaataa
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