Staphylococcus edaphicus: MNY58_08220
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Entry
MNY58_08220 CDS
T09108
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
seda
Staphylococcus edaphicus
Pathway
seda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNY58_08220 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seda03019
]
MNY58_08220 (pnp)
03016 Transfer RNA biogenesis [BR:
seda03016
]
MNY58_08220 (pnp)
Enzymes [BR:
seda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MNY58_08220 (pnp)
Messenger RNA biogenesis [BR:
seda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MNY58_08220 (pnp)
Transfer RNA biogenesis [BR:
seda03016
]
Prokaryotic type
tRNA degradation factors
MNY58_08220 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
SPATA25
ACBP4_C
S1_RRP5
S1_2
Csc2
Motif
Other DBs
NCBI-ProteinID:
UQW80581
LinkDB
All DBs
Position
complement(1698315..1700408)
Genome browser
AA seq
697 aa
AA seq
DB search
MSQEKKVFKTEWANRSLTIETGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLM
VNYEEKMYAAGKIPGGFKKREGRPSDEATLTARLIDRPIRPLFPKGYKYDVQIMNTVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGEYIINPTVAQKEVSRLDLEVA
GHKDAVNMVEAGASEITESEMLEAIFFGHSEIQRLVNFQQEIVDHIQPVKKEFIPVEKDE
SLVEKVKQLTEANGLKDAVLTFDKQQRDINLDALKEKVATEFIDEADEDNETLIKEVNSI
LNDLVKEEVRRLIAEEKIRPDGRKTDEIRPLESEVGVLPRAHGSGLFTRGQTQALSVLTL
GSMSEYQILDGLGEEQQKRFMHHYNFPNYSVGETGPVRSPGRREIGHGALGERALSHIIP
DLKDFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDSYT
ILTDIQGMEDALGDMDFKVAGTAEGITAIQMDIKIDGLTKEIIKEALDQAREGRLAILDH
MLQTIDTSRSELSAFAPKVVTMTIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAVDKEAIAHARSIIEDITREAEVGQVYEGKVKRIEKYGAFVELFPGKDALVHISQIAN
ERIDKVEDVLKVGDTFKIKVTEIDKQGRVNASHKVLL
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagagaaaaaagtttttaaaaccgagtgggcaaacagatcattaacgattgaa
actggccaacttgctaaacaagccaatggggccgtacttgttcgttatggtgatacagta
gtattatctactgcagtggcttctaaagaaccgcgtgatggcgattttttcccattaatg
gttaactatgaagaaaagatgtatgcagcaggtaaaattccgggtgggtttaagaagcgt
gaaggacgtccaagtgacgaagcaactctaacggcacgtttaatcgatagacctattcgt
ccactgttccctaaaggttataaatatgatgtacaaataatgaatacagtgcttagtgct
gacccagattgttctccagaaatggctgcaatgataggctcatcaatggcacttagtgtt
tctgatattccgttccaaggacctattgctggtgttaatgttggatatatcgatggggaa
tatattattaatccaacagtagctcaaaaagaagtgtcacgcttagatttagaggtggct
ggacataaagatgcagtgaatatggttgaggctggagctagcgaaatcactgaaagtgaa
atgctggaagccattttctttggacacagcgaaattcaacgattggttaatttccaacaa
gaaatcgtagaccatatccaacctgtgaaaaaagaattcattcctgttgaaaaagatgag
tcactagttgaaaaagttaagcaactcacggaagccaatgggcttaaggacgcagtttta
acttttgacaaacaacaacgtgacataaatttggatgcgctaaaagaaaaagtagcgaca
gaatttatcgatgaagcagatgaagataatgaaacattaatcaaagaagtaaatagcatt
ctaaacgacttagtaaaagaagaagttagacgattaattgctgaagaaaaaattagacca
gacggacgtaaaacagatgaaattcgcccactagaatcagaggtaggtgtgttacctaga
gctcatggatctggcttgttcacacgtgggcaaacacaagctttgtctgtgctaacttta
ggctcaatgagtgagtaccaaatccttgatgggctaggtgaagaacagcaaaaacgcttt
atgcatcactacaatttcccaaattactcagtaggagaaactgggcccgttagatctccg
ggtcgccgtgaaatcggtcatggtgcattaggtgaacgtgctttaagtcacattattcca
gacttgaaagacttcccatacactgtaagaattgtcagtgaagtgttagaatcaaatggt
tcttcttcacaagcatccatttgtggttcaacattagcattaatggacgcaggtgttcct
ataaaagcaccggttgcagggatagctatgggcttagtaacacgtgatgatagttataca
atcttaactgatattcaaggcatggaagatgcactaggcgatatggactttaaagttgca
ggtacagctgaaggtatcacagctattcaaatggacatcaaaattgacgggttaacaaaa
gaaattattaaagaagcattagaccaagcacgtgaaggtcgtttagcaatattagatcac
atgttacaaacgattgatacttctcgtagtgaacttagtgctttcgctccaaaagtagta
acgatgacgattaaaccagaaaaaattagagacgtgattggacctggtggtaaaaaaatt
aatgaaatcattgatgaaactggtgtaaaacttgatattgaacaagatggtacaatcttt
attggcgcagttgataaagaagcgattgctcatgcgcgttcaatcattgaagatattacg
cgagaagcagaagtaggccaagtctatgaaggtaaggtaaaacgtattgaaaaatatggt
gcctttgttgaattattccctggaaaagatgcgcttgttcatatttctcaaattgcaaat
gaacgaattgacaaagttgaagatgtattaaaagtaggcgacactttcaaaattaaggta
actgaaattgataaacaaggacgtgtcaatgcatcacataaagtactattataa
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