Staphylococcus edaphicus: MNY58_08235
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Entry
MNY58_08235 CDS
T09108
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
seda
Staphylococcus edaphicus
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seda03016
]
MNY58_08235 (truB)
Enzymes [BR:
seda01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MNY58_08235 (truB)
Transfer RNA biogenesis [BR:
seda03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MNY58_08235 (truB)
Prokaryotic type
MNY58_08235 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UQW80584
LinkDB
All DBs
Position
complement(1701920..1702837)
Genome browser
AA seq
305 aa
AA seq
DB search
MYNGILPVFKDRGLTSHDVVFKLRKILKTKKVGHTGTLDPEVSGVLPICIGSATKVSDYI
KEMGKTYEATVCIGITTTTEDQTGEILEQSVINEGDISDKVIDDVLQQFKGEITQIPPMY
SSVKVNGKKLYEYARNNQVVDRPERTVNIYHIKRTSKLHFEDNTCQFDIIVECGKGTYIR
TLATDIGKALTLPAHMSKLTRTQSGGFDIDASLTLEDIKTLHEHDALHEKLFPIEYGLQG
IKQILINDDDIKRKILNGQKFYKSEFKQTIEEIVIMVDDVTLKVLAIYEPHPEKLDEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataatgggattttaccagtgtttaaggaccgtggattaacgagtcacgacgttgta
ttcaagttgaggaaaattttaaaaacaaaaaaagtcggtcatacaggtacgttagatcca
gaagtatctggcgtactaccaatatgtattggtagtgcaactaaagtgagtgactatatt
aaggaaatgggaaaaacttatgaagccacagtttgtataggcattacaacaactactgag
gatcagactggagaaatattagagcaaagtgtaattaatgaaggagatatttcagataaa
gtcattgacgatgtgttacaacaatttaaaggcgagataacgcaaattccaccaatgtat
tcttctgtaaaagtaaacggtaagaaattatatgaatatgcaagaaacaatcaagttgtt
gatagaccagagagaacagtaaatatttaccatattaaacgcacatcaaaattacatttt
gaggacaatacctgccaatttgatattatcgttgaatgtggtaaaggaacttatattaga
acacttgctaccgatattggtaaagcactaacgttaccagcgcatatgtctaaattaaca
cgtacacaaagtggaggatttgatatagacgctagtctaacacttgaagatattaagaca
ttacatgagcatgacgcgttacacgagaaattatttcctatagaatatggtttacaagga
attaagcaaattttaattaacgatgatgacattaagagaaaaatattaaacggtcaaaag
ttttacaaatctgagttcaagcaaacgattgaagaaatcgttataatggtagatgatgta
acacttaaagtgttggcaatttatgagcctcatccagaaaagcttgatgaaattaaacct
aaaaaagtgtttaactaa
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