Staphylococcus edaphicus: MNY58_08875
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Entry
MNY58_08875 CDS
T09108
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
seda
Staphylococcus edaphicus
Pathway
seda00020
Citrate cycle (TCA cycle)
seda00190
Oxidative phosphorylation
seda00650
Butanoate metabolism
seda01100
Metabolic pathways
seda01110
Biosynthesis of secondary metabolites
seda01120
Microbial metabolism in diverse environments
seda01200
Carbon metabolism
Module
seda_M00009
Citrate cycle (TCA cycle, Krebs cycle)
seda_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MNY58_08875 (sdhB)
00650 Butanoate metabolism
MNY58_08875 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
MNY58_08875 (sdhB)
Enzymes [BR:
seda01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MNY58_08875 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_7
Fer4_9
Fer4_17
Fer4_2
Fer4_13
Fer4
Fer4_15
Fer4_16
Fer4_6
Fer4_21
Fer4_4
Fer4_18
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
UQW80701
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Position
complement(1839815..1840636)
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AA seq
273 aa
AA seq
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MADTQEVHDTPAQNEQNQQPSQKTIKLIIKRQDTDKSTPYMEEFEIPYRENLNVIACLME
IRRNPVNSKGEKTTPVIWDMNCLEEVCGACSMVINGQARQSCSAIVDQLEQPIKLEPMST
FPVIRDLQVDRTRMFDNLKRMKAWVPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCL
EVCPNVTQNNDFVGAQAISQVRLFNLHPTGSMTKDERLEALMGGGGLQACGNSQNCVNAC
PKGIPLTTSIAALNRETSFHMFKSFFGSDHQVQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacacaagaagtacatgatactcctgcacaaaacgaacagaatcaacaacct
agtcaaaaaacaattaaattaatcattaaacgtcaagacacggataaatcaacaccttat
atggaagaatttgaaattccatatagagaaaaccttaacgtgattgcctgtttaatggaa
attagacgtaacccagtaaatagcaaaggtgaaaaaacaacgcctgttatttgggatatg
aactgtttggaagaagtatgtggtgcttgttcaatggttatcaatggtcaagcgagacaa
tcatgttctgcgattgtcgaccaactagaacaacctatcaaattagaaccaatgagtacg
ttcccagtcattcgtgacttacaagtcgatcgtactagaatgtttgataacttaaaacgt
atgaaagcatgggttccgattgatggtacttacgatttaggtccaggaccacgtatgcca
gagaaaaaacgtcaaacggcatatgaattatctaaatgtatgacgtgtggtgtttgttta
gaagtttgtcctaatgtaacgcagaataatgatttcgttggtgcgcaagcgatttctcaa
gtgagactgttcaacttacatcctacaggttccatgactaaagatgaaagacttgaagca
ttgatgggcggaggcggtttacaagcatgtggtaactcacaaaactgtgtcaatgcttgt
cctaaaggcattcctttaacaacgtcaattgctgcattaaatagagaaacttcattccat
atgttcaagtcattcttcggttcagatcaccaagtacaataa
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