Staphylococcus edaphicus: MNY58_09105
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Entry
MNY58_09105 CDS
T09108
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
seda
Staphylococcus edaphicus
Pathway
seda00010
Glycolysis / Gluconeogenesis
seda00020
Citrate cycle (TCA cycle)
seda00260
Glycine, serine and threonine metabolism
seda00280
Valine, leucine and isoleucine degradation
seda00310
Lysine degradation
seda00380
Tryptophan metabolism
seda00620
Pyruvate metabolism
seda00630
Glyoxylate and dicarboxylate metabolism
seda00640
Propanoate metabolism
seda00670
One carbon pool by folate
seda00785
Lipoic acid metabolism
seda01100
Metabolic pathways
seda01110
Biosynthesis of secondary metabolites
seda01120
Microbial metabolism in diverse environments
seda01200
Carbon metabolism
seda01210
2-Oxocarboxylic acid metabolism
seda01240
Biosynthesis of cofactors
Module
seda_M00009
Citrate cycle (TCA cycle, Krebs cycle)
seda_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
seda_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
seda_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MNY58_09105 (lpdA)
00020 Citrate cycle (TCA cycle)
MNY58_09105 (lpdA)
00620 Pyruvate metabolism
MNY58_09105 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
MNY58_09105 (lpdA)
00640 Propanoate metabolism
MNY58_09105 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MNY58_09105 (lpdA)
00280 Valine, leucine and isoleucine degradation
MNY58_09105 (lpdA)
00310 Lysine degradation
MNY58_09105 (lpdA)
00380 Tryptophan metabolism
MNY58_09105 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MNY58_09105 (lpdA)
00670 One carbon pool by folate
MNY58_09105 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
seda04147
]
MNY58_09105 (lpdA)
Enzymes [BR:
seda01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MNY58_09105 (lpdA)
Exosome [BR:
seda04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MNY58_09105 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_oxidored
NAD_binding_8
DAO
FAD_binding_2
FAD_binding_3
3HCDH_N
AlaDh_PNT_C
UDPG_MGDP_dh_N
Thi4
Motif
Other DBs
NCBI-ProteinID:
UQW80743
LinkDB
All DBs
Position
complement(1889543..1890949)
Genome browser
AA seq
468 aa
AA seq
DB search
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGELGGVCLNVGCIPSKALLH
ASHRYDETKNSENLGVIAESVSLKFDKVQEFKQSVVKKLTGGVEGLLKGNKVEIVKGEAY
FVDNNSLRVMDEKSAQTYNFKHAIIATGSRPIEIPNFKFGNRVIDSTGALNLQDVPEKLV
VVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMA
KSAEETDNGVKVTYEVKGEEQTIDADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDK
QSRTSAENIFAIGDIVPGLPLAHKASYEAKVAAEVIAGEASEVDYIGMPAVCFTEPELAT
VGYTEAQAKEEGLAVTASKFPYAANGRALSLDDTTGFVKLLTLKEDNTLVGAQVVGTGAS
DIISELGLAIESGMNAEDLALTIHAHPTLGEMSMEAAEKALGLPIHTM
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtagttggagatttcccaattgaaacagatactattgtaatcggagcaggacctggt
ggctatgttgcagcaattcgtgcagcacaattaggtcaaaaagtaacaatcgtagaaaaa
ggtgaacttggcggtgtatgtctaaatgttggatgtattccttcaaaagctttactacac
gcttctcatcgttatgatgaaactaaaaactctgaaaatttaggtgttattgctgaaagt
gtttcacttaaatttgacaaagttcaagaattcaaacaatcagttgttaaaaaattaact
ggtggcgttgaaggactattaaaaggtaataaagttgaaatcgtaaaaggtgaggcttat
tttgttgataataatagcctacgtgttatggatgagaaaagtgctcaaacatataacttc
aaacacgcgattattgcaactggttctagaccaattgaaatccctaacttcaaatttggt
aaccgtgtaatcgattctactggcgcattaaatttacaagatgtaccagaaaaattagta
gtagttggtggcggttatattggttctgaattaggaactgcttttgctaactttggttca
gaagttacaattttagaaggcgctaaagatatcttaggcggtttcgaaaaacaaatgacg
caacctgttaaaaaaggtatgaaagaaaaaggcgttgaaattgtaacagaagcgatggct
aaatctgctgaagaaacagacaatggtgttaaagtaacatatgaagttaaaggtgaagaa
caaactatcgacgctgattacgtattagttacagttggacgtcgtccaaacactgacgaa
ttaggcttagaagaattaggtcttaaattcgccgatcgcggtttattagaagtagataaa
caaagccgtacttctgctgaaaacatttttgcaattggcgatatcgtaccaggtttacca
cttgcacataaagcaagctatgaagctaaagtagctgcagaagttattgctggagaagca
tctgaagttgactacattggtatgcctgctgtatgtttcacagaacctgaattagctaca
gttggttatacagaagctcaagctaaagaagaaggtttagcagtaactgcatctaagttc
ccatatgcagctaatggtcgtgcgttatcattagatgatactactggatttgttaaattg
ttaacacttaaagaagataatacattagtaggtgctcaagtagtaggtactggtgcttct
gatattatttctgaattaggtttagcaattgaatcaggaatgaatgctgaagatttagca
ttaactatacatgctcacccaacattaggtgaaatgtctatggaagctgctgagaaagca
ttaggattacctattcacacaatgtaa
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