KEGG   Staphylococcus edaphicus: MNY58_09105
Entry
MNY58_09105       CDS       T09108                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
seda  Staphylococcus edaphicus
Pathway
seda00010  Glycolysis / Gluconeogenesis
seda00020  Citrate cycle (TCA cycle)
seda00260  Glycine, serine and threonine metabolism
seda00280  Valine, leucine and isoleucine degradation
seda00310  Lysine degradation
seda00380  Tryptophan metabolism
seda00620  Pyruvate metabolism
seda00630  Glyoxylate and dicarboxylate metabolism
seda00640  Propanoate metabolism
seda00670  One carbon pool by folate
seda00785  Lipoic acid metabolism
seda01100  Metabolic pathways
seda01110  Biosynthesis of secondary metabolites
seda01120  Microbial metabolism in diverse environments
seda01200  Carbon metabolism
seda01210  2-Oxocarboxylic acid metabolism
seda01240  Biosynthesis of cofactors
Module
seda_M00009  Citrate cycle (TCA cycle, Krebs cycle)
seda_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
seda_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
seda_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:seda00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MNY58_09105 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MNY58_09105 (lpdA)
   00620 Pyruvate metabolism
    MNY58_09105 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MNY58_09105 (lpdA)
   00640 Propanoate metabolism
    MNY58_09105 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MNY58_09105 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MNY58_09105 (lpdA)
   00310 Lysine degradation
    MNY58_09105 (lpdA)
   00380 Tryptophan metabolism
    MNY58_09105 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MNY58_09105 (lpdA)
   00670 One carbon pool by folate
    MNY58_09105 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:seda04147]
    MNY58_09105 (lpdA)
Enzymes [BR:seda01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MNY58_09105 (lpdA)
Exosome [BR:seda04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MNY58_09105 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA HI0933_like FAD_oxidored NAD_binding_8 DAO FAD_binding_2 FAD_binding_3 3HCDH_N AlaDh_PNT_C UDPG_MGDP_dh_N Thi4
Other DBs
NCBI-ProteinID: UQW80743
LinkDB
Position
complement(1889543..1890949)
AA seq 468 aa
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGELGGVCLNVGCIPSKALLH
ASHRYDETKNSENLGVIAESVSLKFDKVQEFKQSVVKKLTGGVEGLLKGNKVEIVKGEAY
FVDNNSLRVMDEKSAQTYNFKHAIIATGSRPIEIPNFKFGNRVIDSTGALNLQDVPEKLV
VVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMA
KSAEETDNGVKVTYEVKGEEQTIDADYVLVTVGRRPNTDELGLEELGLKFADRGLLEVDK
QSRTSAENIFAIGDIVPGLPLAHKASYEAKVAAEVIAGEASEVDYIGMPAVCFTEPELAT
VGYTEAQAKEEGLAVTASKFPYAANGRALSLDDTTGFVKLLTLKEDNTLVGAQVVGTGAS
DIISELGLAIESGMNAEDLALTIHAHPTLGEMSMEAAEKALGLPIHTM
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggtagttggagatttcccaattgaaacagatactattgtaatcggagcaggacctggt
ggctatgttgcagcaattcgtgcagcacaattaggtcaaaaagtaacaatcgtagaaaaa
ggtgaacttggcggtgtatgtctaaatgttggatgtattccttcaaaagctttactacac
gcttctcatcgttatgatgaaactaaaaactctgaaaatttaggtgttattgctgaaagt
gtttcacttaaatttgacaaagttcaagaattcaaacaatcagttgttaaaaaattaact
ggtggcgttgaaggactattaaaaggtaataaagttgaaatcgtaaaaggtgaggcttat
tttgttgataataatagcctacgtgttatggatgagaaaagtgctcaaacatataacttc
aaacacgcgattattgcaactggttctagaccaattgaaatccctaacttcaaatttggt
aaccgtgtaatcgattctactggcgcattaaatttacaagatgtaccagaaaaattagta
gtagttggtggcggttatattggttctgaattaggaactgcttttgctaactttggttca
gaagttacaattttagaaggcgctaaagatatcttaggcggtttcgaaaaacaaatgacg
caacctgttaaaaaaggtatgaaagaaaaaggcgttgaaattgtaacagaagcgatggct
aaatctgctgaagaaacagacaatggtgttaaagtaacatatgaagttaaaggtgaagaa
caaactatcgacgctgattacgtattagttacagttggacgtcgtccaaacactgacgaa
ttaggcttagaagaattaggtcttaaattcgccgatcgcggtttattagaagtagataaa
caaagccgtacttctgctgaaaacatttttgcaattggcgatatcgtaccaggtttacca
cttgcacataaagcaagctatgaagctaaagtagctgcagaagttattgctggagaagca
tctgaagttgactacattggtatgcctgctgtatgtttcacagaacctgaattagctaca
gttggttatacagaagctcaagctaaagaagaaggtttagcagtaactgcatctaagttc
ccatatgcagctaatggtcgtgcgttatcattagatgatactactggatttgttaaattg
ttaacacttaaagaagataatacattagtaggtgctcaagtagtaggtactggtgcttct
gatattatttctgaattaggtttagcaattgaatcaggaatgaatgctgaagatttagca
ttaactatacatgctcacccaacattaggtgaaatgtctatggaagctgctgagaaagca
ttaggattacctattcacacaatgtaa

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