Staphylococcus edaphicus: MNY58_10815
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Entry
MNY58_10815 CDS
T09108
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
seda
Staphylococcus edaphicus
Pathway
seda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MNY58_10815 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seda03019
]
MNY58_10815 (recQ)
03400 DNA repair and recombination proteins [BR:
seda03400
]
MNY58_10815 (recQ)
Enzymes [BR:
seda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MNY58_10815 (recQ)
Messenger RNA biogenesis [BR:
seda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MNY58_10815 (recQ)
DNA repair and recombination proteins [BR:
seda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MNY58_10815 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
ResIII
QueC
Motif
Other DBs
NCBI-ProteinID:
UQW81059
LinkDB
All DBs
Position
complement(2217343..2219121)
Genome browser
AA seq
592 aa
AA seq
DB search
MESTLSHYFGYDTYRPGQKEIITRVMNHHNVLGVLPTGGGKSICYQVPGLMLGGTTIVIS
PLISLMKDQVDQLKAMGIHAAYLNSSLTQKQQKEIETQLRNGEIQFLYVAPERFDNAYFI
RLLQQLPIHLVAFDEAHCISKWGHDFRPSYQDVIHKVFALPQDFTTVALTATATIEVQKD
IMERLNIGKHDEVKTSTKRRNLVFKVNPTYQRQKFVMEYVKEHKNAAGIIYCSTRKQVEE
LHEALENNGVNSTIYHAGLSIKEREAAQNDFVYDRVRVVVATNAFGMGIDKSNVRFVIHY
NMPGDLESYYQEAGRAGRDGLNSDCILLFSERDIGLHQYFISSSKADDDYKDKMGEKLNK
MILYTKTKKCLEATLVHYFEPNEKLEECGQCSNCIVENKTYNMTDEAKMIVSCIARMKQR
ESYSVIIQVLRGEDSDYIRYCDYNQLSTHGIMKNYTTSDLSHLIDELRFKGFLNEHDEIL
TCDNSVKQLLNNQVDIYTTPFKRKSKEKVNINTVEGVDRALFDELIHVRKQLSESLSIPP
VSIFSDFTLEEFAKRKPESKQEMILIDGVGSYKLKHYCPMFLEKIQTYKEKI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaacattatcacattattttggctatgacacgtatcgtcctggtcaaaaagaa
atcataactagagtcatgaaccatcacaatgtgctaggcgtgttaccaactggtggggga
aaatcaatctgttatcaagtaccgggattaatgttaggtggaacgacgattgtcattagt
ccgttaatctctttgatgaaagaccaagttgatcaattaaaggccatgggtatacatgca
gcatacttaaatagtagtttaacgcaaaagcaacaaaaagaaattgagacacaattaagg
aatggtgagattcaatttttatatgttgcacctgagcgatttgataatgcttattttatt
agattactacaacaactaccgattcatttagttgcatttgacgaagcacattgtatttca
aagtggggacacgattttagaccaagttatcaagatgtaattcataaagtgttcgcatta
ccacaagactttacaactgtagcgctaacagcgacggcaacgattgaagttcaaaaagat
atcatggaacgcttgaacattggaaagcacgatgaagtaaaaacaagtacgaaacgacgt
aacttagtctttaaagtaaacccaacataccaacgtcagaaatttgttatggaatacgtg
aaagagcataaaaatgcggcaggtatcatttattgctcaacacggaaacaagttgaagaa
ctacatgaagctttagaaaataatggtgtaaatagtacaatttatcacgctgggctttca
attaaagaacgtgaagcagcgcaaaatgattttgtttatgatcgtgtgcgtgtggtagta
gcgaccaatgcgtttggcatggggattgataaatccaacgtgcgttttgtgattcattat
aatatgccaggtgacttagaatcttattatcaagaggcaggtcgtgctggacgtgatggt
ttaaatagtgattgtatattgctatttagtgaacgtgatattggattgcatcaatacttt
atttcttcatcaaaggcagacgatgattataaagataaaatgggtgagaagctcaacaaa
atgatactttatacgaaaaccaaaaaatgtttagaagcgacgcttgtacattattttgaa
cccaatgaaaaactggaagaatgtggacaatgtagtaattgtattgttgaaaataagact
tacaatatgacagatgaagctaagatgattgtcagttgcatcgcacgtatgaagcaacga
gaaagttatagtgtcatcatccaagttttaaggggcgaggattcagattatattcgatac
tgtgattataatcagctatcaacacacggtattatgaaaaactacacaacatctgacctc
agtcatcttatagacgaacttcgatttaaagggtttttaaatgaacatgatgaaattttg
acttgtgataattcagtcaaacaattgttgaataatcaagtagacatctacactacgccg
tttaaacgtaagtcgaaagaaaaagtgaatatcaatacggttgaaggtgtagatcgagca
ttattcgatgaattaattcatgtgcgtaagcaattaagtgaatcattaagcataccgcca
gtgagtattttctcagatttcaccttagaagaatttgccaaaagaaaacctgaatctaaa
caagaaatgattttgattgatggggttgggagttataaattaaaacactattgtccgatg
tttttagagaaaatccaaacatataaagaaaaaatataa
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