Sediminibacillus dalangtanensis: ERJ70_02195
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Entry
ERJ70_02195 CDS
T07146
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sedd
Sediminibacillus dalangtanensis
Pathway
sedd03420
Nucleotide excision repair
sedd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sedd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERJ70_02195 (pcrA)
03430 Mismatch repair
ERJ70_02195 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedd03400
]
ERJ70_02195 (pcrA)
Enzymes [BR:
sedd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERJ70_02195 (pcrA)
DNA repair and recombination proteins [BR:
sedd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERJ70_02195 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
ERJ70_02195 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTM98227
LinkDB
All DBs
Position
422099..424324
Genome browser
AA seq
741 aa
AA seq
DB search
MSRTMDDLLKGLNEEQRRAVTHTEGPLLIMAGAGSGKTRALTHRIAYLLGEKEVSPRSIL
AITFTNKAAREMKDRVYQLVGPDGANIWVSTFHSMCVRILRRDIDRIGINSNFSILDSSD
QLSVIKQILKDLNIDPKKFEPRAMLGAISSAKNELITPDEYSKTVGSFYEKQIAEVYERY
QKTLRKNQSLDFDDLIMQTINLFDRVPEVLEYYQRRFQYIHVDEYQDTNHAQYYLVKQLA
DRYQNLCVVGDSDQSIYRWRGADIQNILSFEKDYPNARTVMLEQNYRSTKSILDAANTVI
KNNSGRKPKNLWTENNEGSKIRYYQAATEQDEGLFVADKVEEFISSGDYTYKDIAILYRT
NAQSRSIEETFVKANIPYQIVGGTKFYDRKEIKDMLAYLRLIANPDDDLSFARVVNEPKR
GVGKTSLEKLQAYAAEHGISLYTAVQEVDFTGVSAKAAKSLAEFGALIRNWTKQQEFLSA
TDMVEQVLKGTGYEEMLKNERSIEAQSRLENLEEFKTVTKHFEENSEDKTLIAFLTDLAL
IADIDKVDDDPMGDNKIVLMTLHAAKGLEFPVVFLIGMEENVFPHSRSIMDDEEMEEERR
LAYVGITRAEKQLFLTHAKMRTLYGRTNMNPVSRFINEIPEELMDGLEEAKQAPFGFGPT
QSKPDPFAAPKRSAKKINRPATTGGESIGWQPGDKANHKKWGQGTVVKVHGEGEAMELDI
AFPAPTGIKRLLAKFAPITKE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgaacgatggatgacttgctgaaaggattgaacgaggaacaacggagagcagta
acccatacggaaggaccgcttttgattatggccggagccggaagtggaaaaacccgtgcg
cttacccaccggattgcctatttacttggagaaaaagaagtttccccgcgaagcattttg
gcaatcaccttcaccaacaaagcagcgagggaaatgaaagatagagtttatcagcttgtg
ggtccagatggggctaatatttgggtatcgaccttccactcgatgtgtgtacggatactg
cgcagagatatcgaccggatcggcatcaacagtaacttttcgattctcgacagcagcgac
cagctgtctgttatcaagcaaattttgaaagacttgaatatcgatccgaaaaaatttgag
ccgcgggcgatgctgggcgccatcagttcggcgaaaaacgagctgatcaccccggatgaa
tacagcaaaacggtcggaagcttttatgaaaaacaaatcgccgaagtctacgagcgttat
cagaagacattgagaaagaaccagtcgcttgattttgatgatttgatcatgcagacgatc
aacttgttcgaccgtgtcccggaagtactggagtactaccaacgtcgttttcaatacatc
catgtcgatgagtaccaggataccaaccatgcgcaatattacctggtaaaacaactggca
gaccgctatcagaatctctgtgtcgtcggggactccgaccagtcgatctatcgctggcgc
ggtgcggatattcaaaacatcctgtcttttgaaaaagattacccgaacgcgagaacggtt
atgctcgaacaaaattaccgttccaccaaatcgattctcgatgcggccaatacggtcatc
aaaaacaactccggaagaaaaccgaaaaatctgtggacggaaaacaacgaaggaagcaaa
atccgttattatcaggcagctaccgaacaggatgaaggattgttcgttgccgataaagtg
gaagaatttatttcttccggtgattatacgtacaaagatatcgcaattctgtaccggacc
aatgcccaatcccgttccatcgaggaaacgtttgtcaaagcgaacatcccttatcaaatc
gtcggcggaaccaagttctatgacaggaaagaaatcaaagacatgctcgcttatctgcgg
ttgattgccaatccggatgatgacttaagctttgcgcgcgtagtcaatgaaccgaaacgt
ggtgtggggaaaacctctctggaaaagctgcaggcttatgcggccgagcatggaatctcg
ttgtacacagcggtccaggaagttgatttcaccggcgtgagcgccaaggcggctaaatcg
cttgccgaattcggtgcattgatccgcaattggacgaaacaacaggaattcctgtccgcc
accgatatggttgaacaggtattgaaagggacaggctatgaagagatgcttaagaatgaa
cgcagtattgaagcacagagccgcctggaaaacctggaggaattcaaaacggtaaccaag
cattttgaagaaaacagcgaagacaaaaccttgattgcctttctgacagatttggcattg
atcgctgatatcgacaaggtcgacgacgacccgatgggtgacaataaaatcgtccttatg
acactgcatgcggcaaaaggacttgaattcccagtcgtattcctaatcggcatggaggaa
aacgtctttccgcacagccgctcgatcatggatgacgaagagatggaggaagagcgccgg
cttgcttatgtaggcattacccgggcggaaaagcagttgttccttacccatgcaaaaatg
cggacactatacggccgcactaatatgaacccagtcagtcgtttcatcaatgaaattccg
gaagagctgatggatggcctggaagaggccaaacaagcaccgttcggcttcgggccgacc
caatcgaaaccagatccgttcgcggcaccaaaacggtcggcgaagaaaatcaatcgtccg
gcgacgactggcggagaaagcattggctggcagccgggcgataaagccaatcacaaaaaa
tggggacagggaacggtggtcaaagtccatggcgagggcgaagcgatggaactggatatc
gcttttcctgcaccgacaggcatcaagcggcttctggcaaagttcgcaccaatcactaaa
gaataa
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