Sediminibacillus dalangtanensis: ERJ70_04445
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Entry
ERJ70_04445 CDS
T07146
Name
(GenBank) hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sedd
Sediminibacillus dalangtanensis
Brite
KEGG Orthology (KO) [BR:
sedd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sedd03019
]
ERJ70_04445
Messenger RNA biogenesis [BR:
sedd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERJ70_04445
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GFIT
Motif
Pfam:
HD
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
QTM98612
UniProt:
A0ABX7VP13
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Position
complement(886896..888125)
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AA seq
409 aa
AA seq
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MADQASYFYDFIPINYTKDELQRKQILAEFPPPALPESSEFFILDDQVPGSTINLRLLLN
DYQVQLTKTNKQFLKLRFSNNAGVMNAKMWDNQGSVEQNQPLLEKFAVFDVEAMVDEFRG
FKSLTIQKLTPCKTEVNPFSLLPYTQQSIEDLTVELFSYLDELQHPYRQIARAVMTRFWD
QFRIRPAAKGYHHNYLGGLLKHTVGLMRFARYLLKTEDNHFQAAMKLINVVEKAYKSELW
SQFQSDNGLQHLVWKDTIDHLYRQLQGMMEHKEKQPDYDVIMTSILFHDIGKLLEYDHAG
KTFDTFHFLFPTAEQTVQENRKQAGITMDELGVMIGHIPYGVLLLNKIIETEGISLSMET
IHQMSHCILCHHGLPEWGSCIQKPQTIDGYIIHFVDYLDSRYENSEVVK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcaagcctcttatttttatgattttatcccgattaactatacaaaggatgaa
ttacagcggaagcaaattctggctgaattccctccgcctgcactcccggaaagcagtgaa
ttttttatactggatgaccaagtgccgggcagtaccatcaacctccggcttttattaaat
gactatcaagtccagctcaccaagaccaacaaacagtttctaaaactccgtttcagtaat
aatgcaggtgtaatgaatgcaaagatgtgggataatcaaggctccgtcgaacaaaaccag
ccacttctggaaaagttcgctgtgtttgatgtagaagcgatggttgatgagttcagagga
tttaaatcgctcactatccaaaaacttacaccatgtaaaacagaagtaaaccctttttct
ctgttgccatatacccaacaaagcatcgaagacttgacggtggagttgttcagttacctt
gatgaattacaacacccttaccgccaaatcgcccgcgccgtcatgacccgcttttgggat
caatttcgaatcaggccggctgcaaaaggatatcaccataattatttgggaggactgcta
aagcatactgtcggtctgatgcgattcgccagatatcttttaaaaacagaagataaccac
tttcaagcagcaatgaagctgatcaatgtagtggagaaagcatataaaagtgaactgtgg
tcgcaattccagtcagataatggcctgcagcatttagtctggaaggacacaatcgatcat
ttgtaccgacagttacaaggtatgatggagcataaagaaaaacaaccggattacgatgtg
atcatgacgagtatattgttccacgatatcggaaagctgcttgaatacgaccatgccggt
aaaacgttcgatactttccactttctatttccgacagcggagcaaacagtacaggaaaat
cgaaagcaagccggtatcacgatggatgaattgggagttatgatcgggcatattccctat
ggggtcctgctgttgaacaaaataattgaaaccgaggggatttcgttatccatggaaacc
attcatcagatgtcccattgcatattatgccatcacggacttccagaatggggatcctgt
attcaaaagccgcaaacaatcgacggatacatcatccattttgtcgattatctggacagt
cgctacgaaaacagcgaagtagtgaagtaa
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