Sediminibacillus dalangtanensis: ERJ70_04685
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Entry
ERJ70_04685 CDS
T07146
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sedd
Sediminibacillus dalangtanensis
Brite
KEGG Orthology (KO) [BR:
sedd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedd03400
]
ERJ70_04685 (addB)
Enzymes [BR:
sedd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERJ70_04685 (addB)
DNA repair and recombination proteins [BR:
sedd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ERJ70_04685 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QTM98653
LinkDB
All DBs
Position
929718..933209
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AA seq
1163 aa
AA seq
DB search
MGVRFLLGKAGAGKSNHCLQEIEGKLNEDPKGPPLLYIVPDQMTFQQEYALLKRDSINGS
IRGQVFSFSRLSWRVFQETGGGTRKFISSTGVQMMLRKITEERKSDWNVFQKAIEKQGFM
EQLEQMITEFKRYRISPEALAGQIVNMDRFTHKYPGENALRNKLEDLSYIYDRLVDALRD
QYIDSEDQLQLLAEKIEEASSLEDAEVYIDGFHHFTPQEMQVVEALMKKTKQVTITLAID
GPADEEASELDLFCLPTETYHAVRAVAKENGIPVDEIRHLGQEEGRFANRPYFSHLEKYF
DKRPAPEYPGYVPIQLAQAVHPRAEVEGAAQEILRIVREEGYRYKDIAVLIRQTDVYHDL
IDTVFEDYGIPVFIDEKRTMMNHPLLELIRSALDVVEGNWRYDAVFRLLKTGFIPASDSE
YPLTEDAIDELENYVLEYGIRGRDRWFSDQEWRFQRFRGFDQASQTDKEREIQSRINRYR
SQVVQFLQPFDEQVRGAATVMDRASILFEWLETLQVPRQLEEVRTELDEQGRNEQGREQE
QVWDGVIQLLDEMVEIIGEERLSLQVFRTTLESGFESLKFAHVPPSMDHVVTGTIDRSRI
SGIKCAFLLGVNEGVWPMKPAADGMISEEERELLAEQGLRLADGSKRQLLDDWFYVYLAF
TCAQDKLWISYPLSDEEGKSKVPSQLINRIEDLFPTCCDHLLLQDPEELMEADRFISTPI
KTRSALTAQLARNLRGYPIHDIWWNVLNWYIEHEPKDGTVFTILQSLFYKNTPTNLKEET
AKQLYPREVKASVSRLEMYYRCSYQHFAKYSLGLEERRTYKLDAPDIGQLFHEALKKITE
WIQQEGRNFSDLQRDETSKYASRAVQNLAPVLQHQILHSSNRYQYIQQKLQEIIARAAFV
LSEQARQSKFSPIGLELGFGPNQELPPITIDLPNGFELMLRGRIDRVDKALEQENLLLRI
IDYKSSSKGLNLVEVYYGLALQMLSYLDVILSHSEQWLGAKASPAGVLYFHVHNPMISGN
KRLDDPDIEQEIFKKFKMQGLLLEDEQIVKMMDTGLDSGMSQIVPAGLKKNGGFRKGSYT
AGQEAFDQLREYIRDLMVQAGTDITDGGVHLNPYQQKQQVACTYCPFKSVCQFDPTLHEN
NYRRLKDMKDDEVLDLITRKEED
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtccggtttttattaggaaaagcaggggctggaaaaagtaatcactgcctgcag
gaaatagaaggaaaattgaacgaagatccaaaaggaccaccgcttttgtatattgtgccg
gaccaaatgacctttcagcaggaatatgcgctactgaaaagggattcgatcaacgggagc
atcagagggcaggtattcagtttttcacgtttgtcctggcgggtttttcaggagaccgga
ggaggcaccaggaagtttatcagctctacgggtgtccaaatgatgcttcggaaaatcacc
gaggaacggaaatccgattggaatgtgttccaaaaagcgattgaaaagcaaggcttcatg
gagcaattggagcagatgatcaccgagttcaaacggtaccggatttcccctgaagcactt
gccgggcaaatcgttaacatggatcgcttcacccataagtaccccggggagaatgcattg
cggaataagctggaagacttgagttatatctatgaccggttggtcgatgcgttgcgagat
caatatattgatagtgaggatcagctgcagctgttggcggaaaaaatagaagaggcatca
tcccttgaagatgcagaagtgtatattgacggatttcatcatttcacgccgcaggaaatg
caagttgtcgaagcattgatgaaaaaaacaaagcaggtgaccatcactctggctatagat
gggccagcagatgaagaagcgtctgaactggatttgttctgtctgccgaccgaaacctat
catgctgtccgggctgttgcaaaggaaaacggcatcccggtcgatgaaatccggcacctt
gggcaggaagaaggacggtttgccaacagaccatatttttctcatttggagaagtacttt
gataaacgaccggcacctgaatacccgggctatgtgccgattcagctggcacaggctgtc
catccgcgtgcagaagtagaaggagcggcacaggaaatcctgcgtatcgtccgggaggaa
ggctaccggtataaagatatcgctgttctgatccgccaaacggacgtttatcatgatttg
atcgacaccgttttcgaagattacggtatccctgtgtttatcgatgaaaaacggacgatg
atgaatcatccgctgctggagcttatccgttccgcacttgatgtagtggaagggaactgg
cgctatgatgcggtattccgtcttctgaaaacgggctttattcctgcatctgacagtgaa
tatcctttaacggaagatgcgattgatgaattggaaaattatgttctggaatatggcatc
cgtggtagagaccgctggttcagtgaccaggagtggaggtttcagcgttttcggggattt
gaccaggcatcgcaaacagataaagaacgggaaatccagtcgaggatcaaccgctaccgc
agccaagtagtccagtttcttcaaccgtttgacgaacaagtcaggggagcggctactgtc
atggatagagcgagtatcctttttgaatggttggaaacgctccaagtaccacgccaactg
gaagaagtccgtacggaattggacgagcaggggcgaaatgaacaagggcgggaacaggaa
caagtatgggacggggtgattcagcttctcgatgaaatggtagagattatcggggaagag
cgtttgtcgttacaggtgttccgtactaccctggagtccggttttgaatcgctcaaattt
gcccatgtaccaccaagtatggaccatgttgtcaccggtacaatcgaccggtcgcggatc
agcggtatcaagtgtgcctttttgctgggggtcaacgaaggggtctggccgatgaagccg
gcagcagatggcatgatttcggaagaggaacgggaattgcttgcggagcaaggtctccgt
ttggcagatggcagcaaacgccagctgctggatgactggttttatgtctaccttgctttt
acttgtgcacaggacaagctttggattagctatccgcttagtgatgaggaaggaaaatca
aaagtaccatcccagttgattaatcgtatcgaggatttattcccgacctgttgcgatcac
ctgctactgcaggatccggaagaactgatggaagccgaccggttcatctcgacccccata
aagacgagatcggcgctgacagcgcagctggcccggaatttgcgcggctatccgattcat
gatatctggtggaatgtattaaactggtatatcgagcatgagccgaaggatggcactgta
tttaccattctgcaaagtctgttttataaaaatacgccgaccaatttaaaagaggaaaca
gccaaacagttgtatccacgtgaagtgaaagcgagtgtctcccgtctggaaatgtattac
cgctgttcctatcagcactttgccaagtacagtctaggcttggaggaacgccgcacttat
aaactggatgccccggatattgggcagcttttccatgaggcattaaagaaaatcacggaa
tggattcaacaagaaggccgcaatttttccgacttgcaacgggacgaaaccagcaagtat
gcaagccgggcggtacaaaaccttgctcctgtgctgcagcatcaaatcctgcacagctcg
aaccggtaccagtatattcagcaaaagcttcaggagattatcgccagggcggctttcgtt
ttaagtgaacaggcaagacaaagtaaattttctcccatcggattggagctcggattcggt
cccaaccaggagctgccgccgattacgatcgacctgccgaatggtttcgaactgatgctg
cggggaagaatcgacagggtcgacaaagcattggaacaggaaaatttgcttttgcggatt
atcgattataaatcaagctccaagggattgaatctcgtagaagtttattacggtcttgcc
ctgcaaatgctgtcttatcttgatgtgattttatcccactcggagcaatggctcggcgcc
aaggcaagccctgccggagtattgtactttcatgttcacaatccaatgatttccggcaat
aaacggcttgatgatccggatatcgaacaggagatttttaagaaattcaaaatgcagggg
ctgctgctggaagacgaacaaattgtcaaaatgatggatacagggcttgacagcggaatg
agtcaaatcgtcccagccggattgaaaaaaaacggtggcttccgcaaaggttcctatact
gcaggacaggaagctttcgatcaattgcgtgagtatatccgggacctgatggtacaggct
ggcacggatattaccgacggtggtgtacatctcaacccgtatcagcagaagcagcaagtg
gcctgtacctactgtccgtttaaatcggtttgccaatttgacccgacgctccacgaaaat
aattaccgcagactgaaggatatgaaggacgacgaagtactcgatttgatcacccggaag
gaggaagactga
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