Sediminibacillus dalangtanensis: ERJ70_05060
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Entry
ERJ70_05060 CDS
T07146
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sedd
Sediminibacillus dalangtanensis
Pathway
sedd03420
Nucleotide excision repair
sedd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sedd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERJ70_05060
03430 Mismatch repair
ERJ70_05060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedd03400
]
ERJ70_05060
Enzymes [BR:
sedd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERJ70_05060
DNA repair and recombination proteins [BR:
sedd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERJ70_05060
MMR (mismatch excision repair)
Other MMR factors
ERJ70_05060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_22
UvrD_C
UvrD_C_2
PhoH
Viral_helicase1
SLFN-g3_helicase
DEAD
AAA_16
AAA_30
ResIII
NPHP3_N
NACHT
nSTAND3
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
QTM98720
LinkDB
All DBs
Position
1006938..1009274
Genome browser
AA seq
778 aa
AA seq
DB search
MGLDFQQEKMRLARVQKTLTEEVDRLEEETSRRKKEVVHIRKHFWDEVKVNTETFDDYLE
TIIGLRQEAQALSVTQSIHRHASKRLSTLHRMQDIPYFGRIDFREDGASDVEEIYIGISS
LRDDSGENFLIYDWRSPIASVYYDFQPGPAKYAAPGGEVQGELKKKWQYLIRGGELESLF
DTSLTIGDEILQEVLGKGTDKQMHSIVATIQQEQNRIIRHDHGRLLVVHGAAGSGKTSVA
MQRIAYLLYKYRDRLHADQIILFSPNSMFSSYVSNVLPELGEENMQQVTFQEYLNHRLNK
QFQVENPYEQLEYVLTAENTSSYQTRLAGIRLKGSSSFVDAVQSYRRSLEYTGMIFKDIA
FRGESIITARQIEERFYNQDASLRFPNRLEKLKDWLIKKIKEIQKVERKRPWVQEEIELL
SDDAYQEARTFLAEKRGLKREEIAHYEVEPDELARLIVHQKWMPLRKKIRSFRFIDFKGI
YRQLFDDSSQFVKGENTAKWSAICKATQEMLDEDKLFYEDAAPFLFLKELIQGFQTNSSI
KHLVVDEAQDYTPFQFEFLKRLFPSARMTVLGDFNQAIFAHANGRVDFDTLTSLYGPDRT
EVINLARSYRSTKPIIECTRRLVPNGGEIIPFERAGERPVLKQVVDRVELHSCIVSQIAA
LQRLGHKSIAIICKSAKESERAYESLACIKDIKLLKSNSATYEQGVVVLPAYLSKGVEFD
AVIIYDASENVYGDESLRRIFYTACTRAMHYLQFYSVGVPSPFLRTVLRNGYVQCAST
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggattggattttcagcaggagaagatgcggttagcccgggttcaaaagacacttacg
gaagaagtcgacagacttgaagaagaaacttccaggcgaaaaaaagaggttgttcatatc
cggaagcatttttgggatgaagtgaaggtgaacaccgaaacctttgatgattacttggaa
accattattggtttgagacaagaggcgcaggccttatcggtaactcagagtatccaccga
catgcatccaagcggctgtcaacattgcaccgtatgcaggacataccctacttcggccgg
attgattttagggaagacggggcttctgacgtggaggagatttacattggcatttcctcg
cttagagacgatagcggcgaaaactttctgatttacgactggaggtcgccgattgcaagt
gtttactacgattttcagcctggtccggcaaagtatgctgctccaggtggagaagtccaa
ggtgaattgaagaaaaagtggcagtaccttattcgcgggggtgagcttgaatctctgttc
gatacgagtcttaccataggggatgaaattttacaggaagtcctgggtaaaggtactgac
aaacaaatgcacagtatagtagcgacaattcaacaggagcagaaccgtattatccgtcat
gatcatggaagactgctagttgttcatggtgcagctggaagtggcaagacttcggtcgct
atgcaacggattgcttatttgctctacaaatatcgagatcgcttgcatgctgatcaaatt
attctgttttcgcctaattccatgtttagcagttatgtgtccaatgtattgccggaactg
ggagaagaaaatatgcaacaagttacgtttcaggaatacctgaatcaccgattgaataaa
cagtttcaagtagaaaatccctacgaacaattggaatatgttttaactgctgagaacacc
tcttcctaccagacaaggctagcgggcatccggttgaaaggatcttccagctttgtcgat
gcggtccaatcgtacagacggtctctggaatataccggaatgattttcaaggatattgcc
ttcagaggggaatcgatcataactgcgagacagatagaagaaaggttttataatcaagac
gcatctcttcgctttcctaacagacttgaaaaattgaaggattggttaatcaaaaaaata
aaagaaattcaaaaggtagaaaggaaaaggccgtgggtacaagaggaaatcgaactacta
agtgacgatgcgtaccaagaggcgcgaaccttcttggcggaaaaacgagggttgaaacga
gaagagattgcccactatgaggtcgagccagacgaacttgcacggttgatcgttcatcaa
aagtggatgccgttacgaaaaaagatccgctcgtttcgtttcatcgattttaaaggaatt
tacaggcagctttttgatgattcctctcaattcgtaaaaggagaaaatacagcgaagtgg
tcggctatttgtaaggcgacgcaggaaatgctggatgaagataaactattttatgaggat
gctgcgccatttctatttctgaaagagttgattcagggctttcagacgaacagctcgatc
aaacatctcgttgttgatgaggctcaggattatacaccttttcaatttgagtttttgaag
cgtttattcccctcagcaaggatgacagtgctcggcgactttaatcaggcaatattcgcc
catgccaatggaagggtagatttcgacacgctaaccagcctgtacggtccggatagaaca
gaagtgatcaatttagcgcggagttaccgatcgaccaaaccgattattgaatgtacaaga
agacttgttcctaatggtggagaaataattccttttgaacgtgctggggaacgacctgtt
ctgaaacaagtagttgatcgagtagaactgcacagttgtattgtctcccaaatagcagcg
ttgcaaaggttaggacataaaagtatcgccatcatatgcaaatccgccaaagaaagtgaa
agggcatatgaatccttggcatgtattaaagatatcaagctgttaaagagtaactcggcg
acctacgaacaaggagtcgttgtgttgccggcatatttgtccaaaggtgtggaattcgat
gctgtgattatttacgatgcatcggaaaacgtgtatggagacgagagtttgcggagaata
ttttacacagcttgcaccagagctatgcattatttgcagttttatagtgtcggggtaccg
agcccctttttgcggaccgtgttgcggaatgggtacgttcaatgtgcctccacctaa
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