Sediminibacillus dalangtanensis: ERJ70_07430
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Entry
ERJ70_07430 CDS
T07146
Name
(GenBank) exopolygalacturonate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
sedd
Sediminibacillus dalangtanensis
Pathway
sedd00040
Pentose and glucuronate interconversions
sedd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sedd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ERJ70_07430
Enzymes [BR:
sedd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
ERJ70_07430
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3
Beta_helix
Pel9A-like_beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
QTM99149
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All DBs
Position
1474186..1478310
Genome browser
AA seq
1374 aa
AA seq
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MKKKCFRLFLVLASCLLIFSNLSLSVLAGPNKNSTNNEWQFAAFGSNTSEEKNPRPLFHE
DGSFRMDAKGGKIASSEEGLSFYFMELPADSNFELHTTVKVDRYSPDSQRSFGLMVRDQV
ADSGDSGKITSNYLAVGGLDDQMRGFYNQAGLTKMNPFDKSNPPVTGESYDLSIKKSGES
YEVAVNGEKQAVSLPDGLSDKLYAGFYVARDAAVTFEDYSLNVADQVPDHLQVDAEHMKQ
SYLIGEQLHLEGLLVTAVYSDGSRELLDSDDFFITGFDSTTAGTTSIAIHYAGASAELNL
EIRDLALTDLHIKYNPAKTDYYLQDTFEPDGLVVEAEFDEGYLVEELEEEQLQFVIDGEI
IDPADYRFNEPGGKMVIVQPKQNPAISVSFQVTVSEAELTGLEIQKAPVKTTYYPGDELD
LAGLIVEATYSDGYVERVMRRQLTASEIDTETLGNQQVKLFYKQTETAFTIQVKEKELQG
LKVMSYPKTTYQIGEEFTSKGLKVGKLYDNQDVEQIDETAYQLDTSAFNGGKTGVYPIQI
IPTKDGIDPITFDVTVRDPLQPEWKSIQFGQSTGPEKNYIEQLDNGAVRIVAEPGAGKVT
GDHDGITFYYTEVDAESDNFQLSADITVREYAKSPAHDGQESFGIMARDAIGKEGDSGVF
ASNIAAIGGFSGGTQEKNGTQLFIRTGVETPDDAGSNGIQKMMLDEEKPTPGNTYPEEAY
RLTLSKTNSGFSGQINDGEQAVFFEPDILNVQDSKMYVGFYTARLADIEVHDIEFEATAQ
ATDPPKVDPPAEPVKPKLEVLSRSKTSESAYELRLRPNVDGFVTVKQGEESVARFHSLQA
GETSAITTDLNANQANDFSISFVPDDTQYLTDYKKIVQNFTVSMKTFRSGRDIHAAPNGS
PEGTGTKENPLDLDTAIAYVQPGQKIILADGNYERNQKLEIEKYNDGTEEARKYLVAEDG
ARPVIDFDKKSEGVVLSGDYWHVTGIDFTRSAGNTKGFTVGGSHNIIEQSRFYENGDTGL
QISRTISEAPSEEWPSDNLVLNSESFDNRDPSDNNADGFAAKLTAGENNVFRGCIAHHNI
DDGWDLYTKAGTGAIGAVLIEDSVAYENGTLSDGTVGDGDKNGFKLGGEGIHVPHVIKDS
IAFSNGAAGFTSNSNPGVIAENNVAYDNAGGNIDFSTYGGIESDFTINRFISYQTAYTVS
DVYPADLASGTNFFFDGEQTENSTGVNLTDESFVSLEPELPYQRDAEGAIIKGDFLKVQL
PAEITLHPHIIKKNKGKKSGKRGPKLNVFIELDQGINLENIEVNKVKLDGDLRPIDQKSM
KIGDHDKDGIPELKLQFSRSALEAKLEKGKQLITIDGELTSGLPFQGQAEILVK
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagtgttttcgactgtttcttgttttggcgtcatgtttgcttatattcagc
aatctgtccctttcggttttagcaggacccaacaagaattcaaccaataatgagtggcaa
tttgctgctttcggatcgaatacgagtgaagaaaaaaatccgcggccgctctttcatgaa
gatggttccttccgtatggatgcaaagggcgggaaaattgccagtagcgaagaagggctg
tcattctattttatggaactgccggctgattccaattttgaattgcatacaaccgtgaaa
gtagaccgatacagtcctgacagccagcgttcatttggactgatggtccgtgatcaggtg
gctgacagtggggattccggtaaaatcacttccaattatttagctgtcggcggactggat
gatcaaatgcgcggtttttataaccaggctgggttaaccaaaatgaatccttttgataaa
agtaatccaccggttaccggggaaagctatgatttatctattaaaaaatcgggagaatca
tatgaggttgctgtaaatggagaaaaacaagcagtttccttacctgacggcctatcggac
aagctatatgccggcttttatgttgcacgtgacgcagctgtaacctttgaagactattct
ttaaacgttgcagaccaggtgccggaccatttgcaagtcgatgctgaacatatgaagcaa
tcttatttaatcggtgaacaactccatttagaaggactccttgtaacagctgtttattca
gatggaagccgtgagttgctcgactcggatgatttttttattaccggatttgacagcacc
acagccggaactacttccatagcgatacattatgctggagcctcggctgagttaaacttg
gaaatccgggatttggcactgaccgacctgcacattaaatacaatccggcgaaaaccgac
tattatttgcaagatacctttgaaccagatggactcgtcgtagaagcagagtttgacgaa
ggatacctggttgaggaattagaggaagaacaattacagttcgttatcgatggcgagatt
atcgacccagctgattatcgatttaacgaaccagggggcaagatggtgattgttcagcca
aagcaaaaccctgctatttctgtttcctttcaagtcactgtttcggaagcggaactaact
ggcttagagatccaaaaggctccggtgaaaacgacctattatccgggcgatgagctggac
ttggcaggattgattgtcgaagcgacatacagtgatggttatgtggaacgggttatgcga
aggcagcttaccgcatctgaaatagatacggaaacgcttggcaatcagcaggtgaagcta
ttttataagcagacggagacagcctttactattcaggtaaaagaaaaagaattacaaggt
ttaaaagtgatgagctaccctaaaacaacctaccaaattggggaggaatttacttcaaag
ggacttaaagtaggaaagctgtacgataaccaagatgtagagcaaatcgatgaaacagct
taccaactggatacatctgcgttcaatggtggaaaaacaggtgtttatccgattcaaatt
attccaactaaagatggtatcgacccaattaccttcgatgtaacagttagagatcccctt
caaccagaatggaagtcgattcagttcgggcaatcgacaggaccagagaaaaactatatc
gaacaactggataacggagctgtccggatagtagccgagccgggtgccggaaaagtcaca
ggagatcatgacggcattacgttctattatacagaagtagatgcagaatcggacaatttc
cagctatctgctgacattactgttcgggaatacgccaaaagtccggcacatgatggacag
gaatcatttggcatcatggcaagggatgcgattggaaaggaaggagactccggcgttttc
gcttctaatatagcagcgatcggcggcttcagcggcggtacacaggaaaaaaacggtaca
cagctgtttatccggacaggggtggagacaccggacgatgcaggcagcaatggcattcag
aaaatgatgctggatgaggaaaaaccgacaccaggcaacacgtatcctgaagaagcctac
cgtctcactttgtccaaaactaatagcggattttcaggccaaatcaatgatggcgaacaa
gctgtcttttttgaacccgatatcctgaatgtccaagactccaagatgtatgtcggtttt
tatacggcccgcctggcagacatcgaagttcatgatatagaatttgaagctaccgctcaa
gctacagatccgccaaaagtggatcctcctgcagaaccagttaagccgaaactggaagtg
ttatcaagaagtaaaacttctgaatctgcttatgagttacgcttgagaccaaatgtcgat
ggatttgttaccgtcaaacaaggagaggaatcggttgcccgttttcattctcttcaagcg
ggagaaacttcggcaataacaaccgatcttaacgccaatcaggcgaatgatttcagtatt
tcttttgttcctgatgatacacaatatttaactgattacaaaaaaatcgtacaaaatttc
actgtctccatgaagacctttcgtagtggccgggatattcatgcagctcctaacggttcg
ccagaaggaaccggaacaaaagaaaacccgcttgatctggatactgctattgcttatgtt
cagccaggacagaaaatcatattggcggacggcaactatgaacgtaatcaaaaattagaa
attgaaaaatataatgacggtacagaagaagcaagaaagtatttggtcgcagaggatggt
gcgagacctgtcattgactttgacaagaaatcggagggcgttgtgctcagtggtgactat
tggcatgtaaccggcattgatttcactagatctgccgggaatacaaagggattcacggta
ggaggcagccataacatcattgaacaaagtcgtttttatgagaacggtgataccggcttg
cagatcagtcgaacgatttcggaagcgcctagtgaagaatggccatctgataatttggtt
ttgaacagtgaatccttcgacaatcgagatccttctgacaataatgccgacggatttgcc
gcgaaactaactgctggagaaaacaatgttttccgagggtgtattgcccaccataatatc
gatgatgggtgggatttatatacaaaggctggtaccggtgcaatcggtgctgtcctgata
gaggacagtgttgcttacgagaatggtactttgagcgacggcacggttggtgacggtgat
aaaaatggctttaaactcggtggggagggaatccatgtaccacatgtaatcaaggacagc
atagcgtttagcaatggtgctgccgggtttaccagcaacagcaaccctggtgttattgca
gaaaacaatgttgcctacgataatgccggtggcaatatcgatttttcgacttatggcgga
atcgaatctgatttcaccatcaatcgatttatttcttatcaaacggcgtatacagtcagc
gatgtttatccggcggatttggcttcgggaacaaactttttctttgacggcgagcagact
gaaaatagtacaggagttaaccttaccgatgagagctttgttagtctggagccggaacta
ccttaccagcgtgatgctgaaggggcgattattaaaggtgatttcctaaaagtccagctt
ccggctgaaatcacactccatccacatattataaagaaaaacaaaggaaaaaaatctggt
aaaagaggccctaaactgaatgtttttatagaacttgatcaaggaatcaaccttgaaaat
atagaagtgaacaaggtcaaacttgatggggatttacgtcctatagatcagaagtctatg
aaaataggggaccatgacaaagatggtattccagaattgaagctgcagttttccagaagt
gcattagaagcaaagcttgaaaaagggaaacaacttattaccattgatggtgaactgact
tctggactgccgttccaaggacaagcggaaatactggttaaatag
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