Sediminibacillus dalangtanensis: ERJ70_08860
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Entry
ERJ70_08860 CDS
T07146
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sedd
Sediminibacillus dalangtanensis
Brite
KEGG Orthology (KO) [BR:
sedd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedd03032
]
ERJ70_08860 (topA)
03400 DNA repair and recombination proteins [BR:
sedd03400
]
ERJ70_08860 (topA)
Enzymes [BR:
sedd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ERJ70_08860 (topA)
DNA replication proteins [BR:
sedd03032
]
Prokaryotic type
DNA Topoisomerases
ERJ70_08860 (topA)
DNA repair and recombination proteins [BR:
sedd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ERJ70_08860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
HypA
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
QTM99402
LinkDB
All DBs
Position
1770758..1772833
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYQVKASMGHVRDLPKSQMGVDVEKAFEPKYITIRGK
GPVLKELKSAAKKAKKVYLAADPDREGEAIAWHLAHSLDIDENSDCRVVFNEITKDAIKE
SFKHPRSIDMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKMIIERER
EINNFQPEEYWSIEADFLKGKDTFEGAFYGIDGKKQELGTKEEVDRVLAALKGKEFNVAK
VNKRERKRNPAQPFTTSSLQQEAARKLNFRARKTMMVAQQLYEGIDLGKKQGITGLITYM
RTDSTRISETAKKEAASYIEENYGKEYLGSNKKTKNAEGAQDAHEAIRPTSINRDPKSLK
SILSRDQYRLYKLIWDRFAASQMAPAVMDTMTVHLVNQGVEFRATGSKVKFKGFMKVYVE
GRDDNKKEEDKLLPDLKEGMSIKAEEIRPNQHFTQPPPRYTEARLVRTMEEQGLGRPSTY
APTLDTIQRRGYVTLDNKRFVPTELGEIVIDLLKEFFPEIIDVDFTVKMESDLDAVEDGK
TEWINIIDDFYKGFDKRLEKAEEEMEKVEIKDEPAGIDCENCGHEMVYKMGRYGKFLACS
NFPECRNTKPILKEIGVKCPNCKEGNVVERKSKKRRTFYGCDRYPECDFISWDKPIARPC
PKCDSLLVEKKSKKGVQIQCTNCDYKEETQN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatcttgtaattgtagaatctcctgcaaaagccaaaacaattgaacgttac
ttggggaaaaagtatcaagtgaaagcttcaatggggcacgtgcgggatttaccaaaaagt
caaatgggagtagatgttgaaaaagcatttgaacccaaatatataaccatacgcggcaaa
ggaccggtgttgaaagaactgaagagtgctgccaagaaagcaaaaaaagtataccttgcg
gccgaccctgacagagaaggggaagccatcgcctggcacctcgctcatagtttggatata
gatgaaaattcggactgccgcgtcgttttcaatgagattaccaaggatgcaatcaaggaa
tctttcaagcatccgcgctcgattgacatggacctggtagacgcgcaacaggcccgaagg
attttggatagattggtcggttacaacattagtccacttttatggaagaaagtaaaaaaa
ggattgagtgccggacgggtacaatcggtagccgtcaagatgatcattgagcgggaaaga
gagatcaacaactttcaacctgaagaatactggtcgattgaagccgactttttgaagggg
aaggatacctttgaaggtgccttttatggaatcgatggaaaaaaacaggaactgggaacc
aaagaggaagtggatcgagttcttgcagccttaaaaggaaaagagttcaacgttgccaaa
gtcaataagcgggaacggaagcggaacccggcacaaccctttacgacctcttcccttcaa
caggaagccgcacgaaaactgaatttccgtgccagaaaaacaatgatggtggcacaacaa
ttatatgaaggaatagacttaggtaagaaacaaggcattactggtttgatcacctacatg
agaaccgactctacacggatatcggaaacggcgaagaaagaggcagcttcctatatcgaa
gaaaactatggaaaagagtatcttggttcgaataaaaaaaccaagaatgcggaaggggct
caagatgctcacgaggcaatccgcccaacttccataaacagggatcctaaatcgttgaaa
agtattctttcacgtgatcagtatcgtctctacaagttgatttgggatcgttttgctgcc
agccaaatggcaccggctgtaatggacaccatgaccgttcaccttgtcaatcaaggggtt
gaattccgagctaccggctccaaagtgaaattcaaaggattcatgaaggtatatgtagaa
ggccgggatgataataaaaaagaagaagataagctgctccctgatttaaaggaagggatg
tcaataaaagcggaagaaattcgtcccaatcagcactttacccaaccgcctcccaggtat
acagaagcacgtctcgtcagaacaatggaggaacaaggcttgggcagaccatcgacctat
gcgccgacactggataccattcagcgcagggggtatgtaacgctcgataataaaaggttc
gttcccaccgaacttggtgaaatcgttatcgatttattgaaagaattttttcccgaaata
atcgatgtggattttactgtcaagatggaaagtgaccttgatgcagtagaggatggtaag
acagaatggattaacattatagatgatttctataaaggatttgacaaacgtcttgaaaaa
gcggaagaggaaatggaaaaggttgagatcaaagatgaaccggctggtatcgattgtgaa
aattgcggtcatgaaatggtctataaaatgggtagatacggcaagttcttagcttgttcc
aatttcccagaatgcagaaatacgaaacctattctcaaggaaattggggtcaagtgtccg
aattgtaaagaaggaaacgttgtcgaaagaaaatcgaaaaagcgtcgcaccttctatgga
tgcgatcggtacccagaatgtgattttatctcttgggataagccgattgcacgtccttgt
ccaaaatgtgattccttattggtagagaaaaaatcgaaaaaaggtgtacaaatacaatgt
accaattgtgactataaggaagaaacacaaaactga
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