Sediminibacillus dalangtanensis: ERJ70_11420
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Entry
ERJ70_11420 CDS
T07146
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sedd
Sediminibacillus dalangtanensis
Brite
KEGG Orthology (KO) [BR:
sedd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sedd03019
]
ERJ70_11420
03009 Ribosome biogenesis [BR:
sedd03009
]
ERJ70_11420
Enzymes [BR:
sedd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ERJ70_11420
Messenger RNA biogenesis [BR:
sedd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ERJ70_11420
Ribosome biogenesis [BR:
sedd03009
]
Prokaryotic type
rRNA helicases
ERJ70_11420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QTM99849
LinkDB
All DBs
Position
complement(2272747..2274060)
Genome browser
AA seq
437 aa
AA seq
DB search
MKNHHFRQYSLHPVINDVIDRLDFHKPTPIQEKVIPAVLRGESVIGQSHTGSGKTHAYLL
PLFNEMEETKKQVQFVVTAPTRELAIQIYDEVRKIIHYANKDHRWNAKLLIGGTDKKRSI
EKLKEQPHIVVGTPGRILDLVEEGALDLYNAKAFVVDEADLMLDLGFIQEVDKTLVKTNQ
EIQLLVFSATIPERLQPFLKKYLENPAHLTADEHKLSPETMEHRLVPLRHRSVSEMVFRI
SGAIQPYLAIIFTNGKELANQLAEELTEKGMDVGLIHGGLSPRERKRVLKEIQNLRYQYI
VATDLAARGIDIKGVSHVINAQLPKEEEFYIHRVGRTARAGMEGTAINLYTDQDVQLIEK
LEKKGLTFTSFDVKDGEWKEVKAWNERSTRKKAESDAEKEAWRKVRKPKKVKPGYKKKMK
QQKEQVKKKLNRDKYKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccatcattttagacaatattctttgcatcctgttatcaatgacgtcattgac
cgacttgatttccataaaccgaccccgatccaggagaaggtgattcctgccgttctgaga
ggggagagtgtgattggccaatcccacactggatccggcaaaacccatgcttatttacta
ccattgtttaatgaaatggaggaaacgaaaaaacaggttcaatttgtggttacagcacct
acaagggaactggctatccaaatttatgacgaagtaaggaaaatcattcattatgccaac
aaagatcatcgctggaatgcgaaattgctgattggcggaacggataaaaaaagatcgatt
gaaaagctgaaagaacagccacatattgttgtcggtaccccggggagaatattggacctt
gtcgaggaaggagcacttgatttatataatgccaaggcattcgttgtcgatgaagcggac
ttaatgcttgatcttggtttcattcaagaggtcgacaagacgttggtaaagacaaatcag
gaaatacagctcctcgtattttctgcgaccattccggaaaggctgcagccgttcttaaaa
aaatatttggagaatccggcgcacttaactgcagatgaacataagctttcaccggaaacg
atggagcatagactagtacctttacggcatcgttctgtttcggaaatggtctttcgtata
tcaggagccattcaaccttacttggcaattatttttacaaatggaaaggaattggctaac
caacttgcggaagagctgaccgaaaaaggaatggatgtagggcttattcatggagggctt
tctccgagagaaagaaaacgggtgttgaaggaaattcaaaatcttcgttatcaatatatt
gttgctaccgatctggcggctagaggtatcgatattaaaggtgtcagccatgtaatcaat
gcccagctgcccaaagaagaagaattttatatccatcgagttggccgtacagcgcgcgca
gggatggaaggtacagcgatcaatctgtacaccgatcaagatgttcagctaattgaaaaa
ctggagaaaaaaggattgacattcaccagctttgacgtaaaagatggagaatggaaggaa
gtaaaagcttggaacgaacgaagcacaaggaaaaaagctgaatcagacgcggaaaaagaa
gcatggcgcaaggtccgtaaaccaaaaaaagtgaaaccaggttacaaaaagaaaatgaag
caacagaaggagcaagtaaagaaaaagttaaatcgtgataagtataaaaaataa
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