Sediminibacillus dalangtanensis: ERJ70_17640
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Entry
ERJ70_17640 CDS
T07146
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sedd
Sediminibacillus dalangtanensis
Pathway
sedd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sedd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERJ70_17640 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sedd03019
]
ERJ70_17640 (recQ)
03400 DNA repair and recombination proteins [BR:
sedd03400
]
ERJ70_17640 (recQ)
Enzymes [BR:
sedd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERJ70_17640 (recQ)
Messenger RNA biogenesis [BR:
sedd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ERJ70_17640 (recQ)
DNA repair and recombination proteins [BR:
sedd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ERJ70_17640 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
HTH_40
RecQ_Zn_bind
ResIII
DUF1804
Cas3-like_C_2
HHH
Sigma70_r4_2
Helicase_Sgs1
QueG_DUF1730
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QTN01621
LinkDB
All DBs
Position
3619004..3621157
Genome browser
AA seq
717 aa
AA seq
DB search
MEKAQHILEEYFGFPSFRPGQQAVIEYVTSQKNALAIMPTGGGKSLCYQIPGLALEGTAI
VVSPLISLMKDQVDALSSLGIPATYINSTLSSEEFQERMQQLRAGRYKFVYAAPERFESP
TFIESIKSINLSLIAFDEAHCISQWGHDFRPSYRSIVPTLAKLPNLPVIVALTATATDEV
NYDIRRLLNIEDEHVINTGFARDNLSFHIVKGSSKRDFVLDYLKERPAESGIIYTSTRKQ
TDTVHQLLESKGYAAAKYHAGLSEQDRKQAQNAFIQDEKTIIVATNAFGMGIDKSNVRYV
IHYALPMNIESYYQEAGRAGRDGEPSDCILLFSGQDIQLQKFLIEQSLMEEDKKTKEYKK
LQAMVNYCHTHSCLQTYILHYFNDYSAVDDCGKCSNCLNSDNREDMTREAQMVLSCIKRM
DERFGAGLTAKVLKGSRDKKVKDFQFDQLSTYGLMSQYTEKELTNFIHFLVAENILSTGD
DRYPILKLTKQAKEVLQGRKQVWVQTGFARSTAAADYHEALFEELRQLRKQIAIEEKVPP
YVLFSDATLKEMARHFPQTKEEMLRVKGVGEKKFEQYGVPFLEAILPWADKVEKKQPEKT
SVVSSQGILEKREKADDRPSHLVSYQLFMDGSTLAEIASSRDITEQTAANHLFKAYAEAN
PLDWDRLFTKSEEEEVLAARKELDEPKLKPIKERIDPAISYTAIKAVLVKHGILLNR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagcccaacacatacttgaagaatactttggttttccaagcttccggcctggc
cagcaagctgtgatcgagtacgtgaccagtcaaaaaaacgcgctcgccattatgccgaca
ggcggtggaaaatcactttgttatcaaattcccgggctcgcccttgagggaaccgccatt
gtcgtttcgccattgatctcgctgatgaaagaccaagtggatgccttgtcctcactcggt
atccccgccacctatattaacagcacgttaagctctgaagaattccaggaacgtatgcag
cagctgcgggccggccgttacaaattcgtttatgcagcacccgagcgatttgaatcacct
acgtttatcgaatcaatcaaatcgatcaacctgtccttgattgccttcgatgaagctcac
tgtatttctcaatggggacacgatttccgtcccagctatcgatcaatcgtgcccactttg
gccaagctgcctaatcttccggtaattgttgccttgactgccactgctaccgatgaggtg
aactatgatatccgcagacttctgaacatcgaagacgaacatgttatcaatacgggtttt
gccagagataatctttcttttcatatcgtcaagggcagcagtaaacgtgactttgtgctt
gattacctgaaggagcgtccggcagagtcaggaatcatttacacatcaactagaaaacaa
accgatacggtccatcagctgctcgaaagcaaagggtatgcggccgccaaatatcatgcc
ggtctttccgaacaggaccggaaacaggcgcagaatgcttttattcaagatgaaaaaacg
atcattgttgccactaatgcatttggcatggggatcgataaatcgaacgttcgctatgtg
attcactatgcactgccgatgaatatcgagtcctattatcaggaagcaggcagagcaggc
agggatggagaacctagcgattgtatcctgcttttctccggccaggatatccagctgcaa
aaatttctcatcgagcaatccctgatggaagaagacaagaaaacaaaagagtataaaaaa
ctgcaggcaatggtcaattattgtcatacccatagttgcctgcaaacgtacatcctgcat
tatttcaatgattattccgccgtggacgactgcggcaaatgcagcaattgtctcaacagc
gacaatcgggaagacatgacaagagaagcccagatggtcctgtcctgcattaagcgcatg
gacgaaaggttcggtgccggattaacagccaaagtgctgaaaggctcgagagataaaaaa
gtaaaggactttcaatttgatcagctgtcgacttatggactgatgtcccaatataccgaa
aaggaattgaccaatttcattcactttcttgtggcagaaaatattctttctacaggggac
gaccgctatccaattctaaagctgaccaaacaagcaaaagaagtactgcaaggccgtaag
caagtatgggttcaaaccggttttgccagaagtacggctgcagccgattaccacgaagcc
ttgttcgaggagcttcggcagttgcgcaagcagatagcgatagaagagaaagtaccaccc
tatgttctgttttctgatgcaacattaaaggagatggcccgtcacttcccgcaaacaaaa
gaagagatgctccgtgtaaaaggagtaggggagaaaaagttcgaacagtatggcgtgcct
tttcttgaagcaattttgccgtgggccgataaagtggagaaaaaacaaccggagaaaacc
tctgtcgtttcgagccaagggattctggaaaaacgagagaaggcagatgacagaccgagt
cacctcgtaagctatcagttattcatggatggctctaccctggcagagattgcatcttcc
cgcgacatcaccgagcagacggccgccaatcatttattcaaggcctatgcagaggccaat
ccgctagattgggacaggctgtttacaaaatcggaagaagaagaagtgcttgccgcccgc
aaggagctggatgaaccaaaactgaagcctatcaaagaaaggatagatcctgctatcagc
tatacggcaatcaaagctgttttagtcaagcacggcattctgcttaatcgctag
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