KEGG   Parasedimentitalea marina: EBB79_00230
Entry
EBB79_00230       CDS       T05780                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
sedi  Parasedimentitalea marina
Pathway
sedi03030  DNA replication
sedi03410  Base excision repair
sedi03420  Nucleotide excision repair
sedi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sedi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EBB79_00230 (polA)
   03410 Base excision repair
    EBB79_00230 (polA)
   03420 Nucleotide excision repair
    EBB79_00230 (polA)
   03440 Homologous recombination
    EBB79_00230 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sedi03032]
    EBB79_00230 (polA)
   03400 DNA repair and recombination proteins [BR:sedi03400]
    EBB79_00230 (polA)
Enzymes [BR:sedi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EBB79_00230 (polA)
DNA replication proteins [BR:sedi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EBB79_00230 (polA)
DNA repair and recombination proteins [BR:sedi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     EBB79_00230 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EBB79_00230 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc Taq-exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AZV76470
UniProt: A0A3T0MXH9
LinkDB
Position
complement(59214..62015)
AA seq 933 aa
MSNTEFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLQRYVEGNTGP
DAPTHVAVIFDHSGKTFRNDLYDLYKANRPPAPEDLRPQFPLTRTATRAFNIACKEVEGF
EADDIMATLACQARDAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKRIDRDGVIEKFGVG
PERVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGDLESLLDRASEIKQPKRRQTLID
KRKQIEMSKTLVQLDCNMALDFTIADLEVRDPDPEVLLGFLAEMEFRTLTKRMADQLGQE
APAIAEAPAGVIEVIAEDVPFDRDAYTCVRSADELQPWIDQIRQRGWVAVDTETTGLDEM
VVDLVGISLCVEPGTACYIPLTHRAAAADDLFGSDDLAKGQMPLTTALEMLKPVLEDPAI
MKIGQNMKYDAKIFARQGITVAPMDDTMLMSYALHGGLHNHGMDTLSERYLDHTPIPIKP
LLGTGKSAITFDKVPVSDAIPYAAEDADITLRLWQLFKPRLHQAKVSTVYETLERPLIPV
LAKMEMDGIKVDRDTLSRMSNAFAQKMAELEADIHALAGRPFNVGSPKQLGEILFDEMGL
EGGKKGKTGAYATGADILEDLATEHDLPARVLDWRQLSKLKSTYTDALQDHINADTGRVH
TSYLQTGANTGRMASKDPNLQNIPVRSEEGRRIREAFIPEPGNVLLSLDYSQIELRILAH
VAGIDALKQAFADGLDIHAMTASEMFDVSLDEMTPEIRRQAKAINFGVIYGISGFGLARN
LRIPRAEAQGFINRYFERFPGIRTYMDATVEFAKEHGYVQTLFGRKIHTPEIAAKGPRAG
FAKRAAINAPIQGTAADVIRRAMIRMPDAIAHLPARMLLQVHDELLFEVPEASVEETIAA
ARTAMENAADPAVHLDVKLIVDAGRGANWAEAH
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgagcaatacggaattcggcaaaggctgccatttgcatctgatcgacggctcggcgttt
atttttcgcgcctatcacgcattgccgccattgacgcgtaaatccgacgggctgccgatt
ggcgctgtcgccgggttctgcaacatgttgcaacgctatgtcgagggcaacaccggcccc
gacgcccccacccatgtagcggtaatatttgaccattctggcaagacgttccgaaatgat
ctgtatgacctttacaaggccaaccgtccccctgcccccgaagatctgcgcccacagttt
ccgctgacccgcaccgccacccgtgcctttaacattgcctgcaaagaggtcgaagggttt
gaggccgatgacatcatggccaccctggcctgtcaggcccgcgatgccggtgggcgctgt
accatcatcagttccgacaaggatctgatgcaactggttggcggcggcgttgaaatgctg
gacgcgatgaaaaacaaacgcatcgaccgggacggtgtgattgagaaattcggcgttggc
cctgaacgggtggtcgatgtacaggcgctggcgggtgatagcgtcgataacgtccccggc
gcgccgggaatcggcattaaaaccgcagcccttctgatcaatgaatacggtgatctggaa
agcctgctggaccgcgccagtgagatcaagcaacccaaacgccgccagaccctgatcgac
aagcgcaagcagatcgagatgtccaagacattggtacagctggactgcaacatggcgctg
gacttcaccattgcagaccttgaggtgcgcgatcccgatcccgaagtgctgctgggcttc
cttgccgaaatggaattccgcaccctcaccaaacggatggcagatcaattggggcaagag
gccccggccattgccgaagcccccgccggagtgatcgaggtcattgccgaggatgtgccc
tttgatcgtgacgcctacacctgtgtccgcagtgccgacgagctgcagccctggatcgac
cagatccgccaacgtggctgggtggcggtagataccgaaaccaccgggctggacgaaatg
gtcgtcgatctggttggtatttccctctgtgtcgagccgggaaccgcctgctacatcccg
ctgacccaccgcgccgccgcagcagatgatctgttcggctcggacgatctggccaagggg
caaatgccactgaccacggcactggagatgctaaaacccgttctggaagacccggcgatc
atgaagatcggccaaaacatgaaatatgacgccaagatctttgcccgtcagggcatcacg
gttgcgccgatggatgacactatgctgatgtcttatgcattgcacggcgggttgcacaat
cacggtatggataccctgtccgaacgctatctggatcacacaccaatcccgatcaaacct
ctgctgggcacaggaaaatccgcgatcacttttgacaaagtcccggtcagcgacgccatt
ccctatgccgccgaggacgccgatattactttgcgcctgtggcagctgttcaaaccgcga
ttgcaccaggccaaagtctccactgtttatgaaacgttggagcggccactgattccggtg
ctggccaagatggaaatggacggtatcaaggttgaccgtgacacgctcagccgtatgtcc
aatgcctttgcccagaaaatggcagagctggaggcggatattcacgcgctcgccgggcgg
ccctttaacgtcggcagcccaaaacagctgggcgaaatcctgtttgacgaaatgggtctc
gaaggtggcaaaaagggcaagaccggcgcctatgctactggggctgatatcctggaggat
ctggccaccgaacacgacttgcccgcacgcgtgttggactggcgtcagctgtccaaacta
aagtctacctacacggatgcccttcaggaccatatcaatgcagacaccggccgggtgcat
acttcttatttgcagaccggtgccaacaccgggcgcatggcctcaaaagatcccaacctg
caaaacattccggtgcgcagcgaagagggccgtcgcatccgcgaggcctttatacctgag
cccggtaatgtgttgctgtcactcgactacagtcagatcgaactgcgcattctggcccat
gttgccggcattgatgcgctgaagcaggcctttgccgacgggttggacattcacgccatg
accgcctcggaaatgttcgacgtatcgctggatgagatgacaccggaaatccgccgacag
gccaaggcgatcaactttggcgtcatctatggcatctcgggctttggcctggcgcgcaac
ctgcgcattccacgggccgaggcacaggggttcatcaaccgctatttcgagcgcttccct
ggcatccgcacctacatggacgcaacggtcgagttcgccaaagagcacggctatgtccag
accctgttcggccgcaagatccatacccctgagatcgctgccaaagggccgcgcgccggt
tttgccaaacgcgccgccatcaacgcaccgatccagggcaccgcagcagatgtaatccgc
cgcgccatgatccgcatgcccgacgccatcgcccacctgcccgcacgcatgctgctgcag
gtgcacgatgaactactgttcgaagtacccgaggcctccgtcgaagaaaccattgcagcg
gcccgcaccgcaatggaaaacgccgccgacccggcggtgcatttggatgtaaaactcatc
gtggatgccggacgtggtgccaactgggccgaggcacactag

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