Parasedimentitalea marina: EBB79_03570
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Entry
EBB79_03570 CDS
T05780
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
sedi
Parasedimentitalea marina
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sedi03000
]
EBB79_03570
Transcription factors [BR:
sedi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
EBB79_03570
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Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AZV77060
UniProt:
A0A3T0MZ71
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Position
complement(712327..713544)
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AA seq
405 aa
AA seq
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MSDFPHIRYLYVVREVYRHQRISAAAEIVHLSQPAATQSLARVEELLGAQLFTRQPKGMF
PTEIGKIFEGRLNRILEHLRRGDSLARKKAARKGVHAPRSAFHKFCSPVQLRALIAIAKT
GSFSQAAFELGVSQPGVHRAIRELASLSGLTLFDQTRGGVTLTAAAEVFTHQVRLAMSEF
QQAVFEINEHLGLDVTRINLGSLPLSRTTILPAAIDDLLSEVGGGVQINCVDARYHALLK
DLRFGELDFLLGALRPPQSSSDIEQEELFVDRLAVVVAPDHPLTKRKTVALQDTLDFPWI
APPRETPSGAYLSDRLHIQDMTNTPVRIVSSSLVLLRGLLSRGDYISIASKRQIQVEEQN
GTLVQLPIDLPESERAIGFTFRTGWTPTPVQQRFLEIIRQKAATE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttccccatatccgatatctctacgtggtccgggaagtctatcgccatcaa
cggatcagtgccgctgccgaaatcgtccatctgtcacaaccggcagccacccagtcgctg
gccagagtggaagagcttttgggggcgcaattgttcacgcgccagccaaagggcatgttt
cccaccgagatcggcaagatattcgaaggccgtctgaaccgcattcttgaacaccttcgg
cgcggcgacagcttggcccgaaagaaggcggcgcgaaagggcgtccacgccccccggtca
gcctttcacaaattctgctcgccagttcagctcagggccttaatcgccatcgcaaagaca
ggcagcttcagtcaggccgcatttgaattgggagtcagccaacccggagtacaccgcgcc
attcgtgagctggcgtctctgtctggtctgacattattcgaccagacccgaggcggtgtt
acgctcaccgcagctgccgaagttttcactcatcaggtccggctggccatgagcgaattc
cagcaggcagtgtttgaaatcaatgaacatctgggcctggatgtcacgcgcatcaatctg
gggtccctgcccctgtcccgcacaaccatactgcctgcagccattgacgatctgctcagc
gaagttggcggcggcgtacagatcaactgcgtggatgcaagataccacgccctgctaaaa
gatttgcggtttggcgagctggactttctgctgggggccctgcgcccgccgcaatcgtcc
agtgatattgagcaggaagagctttttgtcgaccgccttgcggtggtggtagcccccgat
caccccctgaccaaaagaaaaactgtcgccctgcaggataccctcgactttccctggata
gcgcccccccgcgaaacaccgtccggtgcatatctatcagatcgtctacacattcaggat
atgaccaataccccggtgcgcatcgtctctagttcattggtgttactgcgcgggttgctg
tcacgtggagattacatttcgattgcctctaaacggcagatccaagtcgaagagcaaaac
ggaacactggtccaactgccaattgacctgcccgagagcgagcgggcgattggatttacc
ttcagaaccggatggacgccgacaccggttcaacagcggtttctggaaatcattcgtcag
aaggccgcaaccgaatga
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