KEGG   Parasedimentitalea marina: EBB79_04315
Entry
EBB79_04315       CDS       T05780                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sedi  Parasedimentitalea marina
Brite
KEGG Orthology (KO) [BR:sedi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sedi03400]
    EBB79_04315
Enzymes [BR:sedi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EBB79_04315
    5.6.2.6  RNA 3'-5' helicase
     EBB79_04315
DNA repair and recombination proteins [BR:sedi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EBB79_04315
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: AZV80304
UniProt: A0A3T0N8C6
LinkDB
Position
complement(871604..874021)
AA seq 805 aa
MLHLPEQILNWFTTRNWTIHPHQQVMLDRADHPATLLIAPTGGGKTMAGFLPTLAELADG
NHQGLHTLYISPLKALAADIKRNLRTPVDEMSLPIRIDDRTGDTPQSRKKRQRADPPHIL
LTTPESLALLISYPDAARTFAGLQRVVVDEIHALAESKRGDQLMLALARLQTLCPNMRRV
GLSATVDDPQAIAQFLARHPDPCEVLQADPGPTPDIQMLQTTEAPPWAGGGAAYAIPAVM
QQIKAHNTTLIFHNTRAQAEIFFHNLWLANDDSLPIGIHHGSLDREQRNRVETAMVRGDL
CAIVCTGSLDLGLDWGDVDLVIQIGAPKNVKRLVQRIGRANHSYNTPSKALLVPANRFEV
LECRAALEAVRQGDLDGEPRGPGPRDVLCQHILIAACAGPFEANDLFAEMITAGAYATLT
RPEFDACLGFCATGGYALQAYDKWQRLLQRPDGCWQLRDPRASQRIRMNLGTIQDSDTLK
VRLKRSRGGKPLGEIEEAFAASLTPGDTFLIGGQTVRYEGLREMTVEVTRRSGKRPKIAT
FTGTKFATSTQLNARILALLQQGNWLNLPDHTSSWLTLQQQVSQLPEPGRLLIESFPHQS
RPHLCIYGFAGRNAQQTLGLLLTKRMEEMGLDPLGFVATDYATMIWGLKTVNDPAPLFEL
AALRDGLDSWLGENAVMKRSFRACATIAGLIERNSPTARKSGRQATFSSDILYDTLRKYD
PDHLLLQITRTEALRGLVDFGRIEEMIDRIGPRIDLRHLPAITPLAAPLLLEMGKVPIKG
AAMEKLLQQEAADLMQKSGLSSLPD
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgttgcatcttcccgagcagatactcaactggttcaccacacggaactggacaatccat
ccgcatcagcaggtgatgttggaccgtgccgatcaccctgcaaccttgcttatcgccccc
accggtggtggcaaaaccatggcgggtttcctgccaacccttgctgaactggccgacggc
aatcatcaagggctgcacacgctctatatctcgccgctcaaggcgctggcggcggatatc
aaacgtaacctgcgcacccctgtcgacgagatgagtttaccgatccgcattgatgatcgc
accggcgacacgccgcagtcgcgcaagaaacggcagcgtgcggatccgcctcatatccta
ctgacaacccccgaaagcctggccttgctcatctcctacccggatgcagcccgtaccttt
gccggattgcaacgggtggtggtcgacgaaatccacgccctggccgaaagcaaacgcggc
gatcagctgatgctggcgctggcccggctgcaaacactgtgtccaaatatgcgccgggtc
ggactttccgccacagtggatgatccacaggccatcgcgcagttccttgcccgccatcca
gacccctgcgaggtcctgcaggccgaccccggccccacgcccgacatccagatgctgcaa
accaccgaggccccaccctgggccggcggcggtgcggcctatgcaatccccgccgtgatg
cagcaaatcaaggcgcataacaccacgttgatctttcacaacacccgcgcccaggccgag
atcttctttcacaatctctggctcgccaatgacgactccctgcccatcggcatccatcac
ggatcattggaccgtgaacaacgcaaccgggttgaaacggcaatggtgcgcggcgatctg
tgcgcgatcgtctgcactggctcgctggatctggggttggattggggcgacgttgatctg
gtaatccagatcggcgcccccaagaatgtcaaacgtctggtgcagcgcatcggccgcgcc
aatcacagctacaacaccccctccaaggcgctgctggtgcctgccaaccggtttgaagtc
ctcgaatgccgcgccgcgcttgaagccgtgcgccaaggggatctggacggcgagccccgt
ggtcccggcccccgcgacgtgctgtgccaacacatcctgatcgccgcctgcgctggcccc
tttgaggccaatgatctttttgccgagatgataacggctggcgcctacgccactctgacc
cgtcccgagttcgacgcctgcttaggtttttgtgcaaccggcggctatgcccttcaagcc
tatgataaatggcaacgcctgttacaacgccctgacgggtgctggcagctgcgcgacccc
cgcgccagccaacgtatccggatgaacctgggcactattcaggacagtgataccctaaag
gttcgcctgaaacgcagccgcggtggcaaacccctgggcgagattgaggaagccttcgcc
gcctcgctcacccccggcgacaccttcctgattggcggccagaccgtgcgctacgaaggt
ctgcgtgagatgacagttgaggtcacccgacgcagcggcaagaggcccaagatagccacc
ttcaccggcacaaaattcgccacgtccacccagctcaacgcgcgtattctggcgctctta
caacagggtaactggctcaacctgccggatcatacctcctcctggctgaccctgcagcag
caggtgtcgcagctgcccgagccaggccgcctgttgatcgaaagcttcccacatcaatca
cgccctcatctctgcatctatgggtttgccggacgcaacgcccagcagacactcgggttg
ttgcttaccaaacgcatggaggaaatgggcctagatccacttgggtttgttgccacagat
tacgccaccatgatctggggtctcaagacggtgaacgatccagctccgctgttcgagttg
gcggctctgcgcgacggtttggacagttggctgggtgaaaacgcggtgatgaagcgcagc
tttcgcgcctgtgccaccatcgccgggttgatcgagcgtaactcacccacagctcgcaaa
agcggtcgtcaggcgaccttctcctcggacatactttacgacaccctgcgcaaatatgat
cccgaccatctgcttttgcaaatcacccgcaccgaggccctgcgcgggctggtcgacttc
ggccgcatagaagagatgattgaccgcatcggcccccgcatcgacctgcggcacctgccc
gcaatcaccccgcttgccgccccgctgctactcgaaatgggcaaagttccaatcaagggt
gccgcgatggaaaagctgttgcagcaagaggccgccgatctgatgcaaaaatccggtctg
tccagcctgcccgattga

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