Parasedimentitalea marina: EBB79_10660
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Entry
EBB79_10660 CDS
T05780
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sedi
Parasedimentitalea marina
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedi03400
]
EBB79_10660
DNA repair and recombination proteins [BR:
sedi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
EBB79_10660
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
ResIII
FtsK_SpoIIIE
AAA_10
AAA_22
TrwB_AAD_bind
AAA_30
nSTAND3
Zot
T2SSE
Hydrolase
AAA_7
CbiA
Motif
Other DBs
NCBI-ProteinID:
AZV78294
UniProt:
A0A3T0N2R1
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Position
complement(2165222..2166763)
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AA seq
513 aa
AA seq
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MEKTVFVGGGGDDYAAKQGLTLKYANRHGLIAGATGTGKTVTLQILAEGFSNAGVPVILS
DVKGDLSGLAKPGSEGHKLHDAFAARATKIGFESFAYHACPVTFWDLFGVQGHPVRTTVA
EMGPLLLARLLELSDAQEGILNIAFRLADTEGLPLLDLKDLQSMLVWIGENKGQLSLRYG
NVSTASIGAIQRRLLVLENQGGNQLFGEPALELSDLMRCDAEGKGMVNILAADKLMAAPG
LYATFLLWLLSELFEELPEVGDPDKPKLVFFFDEAHLLFDDAPKALVDKVEQVARLIRSK
GVGIYFVTQNPADVPEDILGQLGNRIQHALRAFTAKDRKSLKMAAETYRENPRFSTEEAI
REVGVGEAVTSMLMKKGVPGIVERTLIRPPSSQLGPITKAERVGIMATSEMANKYDKVLD
RRSAYEILSQRAQAAASEAEVIEEQTESLPTMEREYQSARRFTGHRVSRSSSRMTRPRDT
FGSAMSEAVIKELKGTTGRRLVRGILGGLFKGR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacagtttttgttggcggtggtggagacgattacgccgccaaacaggggttg
accctgaaatacgccaaccggcatggtttgatagcgggggcgactgggactggaaaaact
gtaaccctgcaaatactggccgaaggcttttcgaacgcgggcgtgccagtgattttatct
gatgtcaaaggtgatttatcaggattggcaaaacctggtagcgaaggtcacaaattgcat
gatgcatttgccgctcgtgccaccaaaattggatttgaaagtttcgcctaccatgcttgc
ccggtgactttttgggacctgtttggagtccagggtcatccagttcgtaccacagtcgct
gaaatgggtccgcttttactggcgcgtcttttggaactgagcgacgcacaggaaggcatc
ttgaatattgcctttcgattggcagatactgaaggcttgccactgctggatctaaaagac
ctgcagtctatgcttgtctggattggcgaaaataaaggccagctatcacttcgctatgga
aatgtctcaaccgcgtcgataggagccattcagcggcgattgctggtgttggaaaatcaa
ggtgggaaccagctatttggcgagcccgcactagagctgagtgatttgatgcgatgcgat
gccgaaggaaaaggcatggtaaatatcttggctgcagacaaattgatggcggcaccaggg
ttatacgcaacatttctgctgtggttgttgagcgaattgtttgaggaactgcccgaagta
ggtgaccccgacaagcccaagctggtattctttttcgacgaggcgcatttgttgtttgat
gacgcccccaaggcactcgtcgataaggttgaacaggttgcacgtctcattcgatccaaa
ggtgtcgggatctattttgtcactcaaaacccagcggacgttcccgaggatattttaggt
caactgggcaaccgcattcagcatgctttgcgtgcctttacagccaaagatcgcaagagt
ctgaaaatggcggctgagacatatcgagaaaacccgaggttttccactgaggaggctata
cgtgaagttggggttggcgaggcggtgacctcaatgctgatgaaaaagggtgtgccaggc
attgttgaacgtactctgatccggccacccagttcgcaacttggtccaataacaaaagcc
gaacgggtcggcataatggccacgtctgagatggccaataaatacgacaaggttttagat
cgccgttctgcatacgaaattttgtcccagcgggcacaggcagccgcttctgaggccgag
gttattgaggaacagactgaaagtttgcccaccatggaacgtgagtatcaatcggcacgc
cgatttaccggtcaccgggtcagccggtcctcatcgcgcatgacgcgaccgcgtgataca
tttggctcagccatgagcgaagcagtgatcaaagagctaaagggcactacgggccgccgt
ttggtccgagggattttgggcggattgttcaaggggcgttga
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