Parasedimentitalea marina: EBB79_17215
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Entry
EBB79_17215 CDS
T05780
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sedi
Parasedimentitalea marina
Pathway
sedi00630
Glyoxylate and dicarboxylate metabolism
sedi00680
Methane metabolism
sedi01100
Metabolic pathways
sedi01120
Microbial metabolism in diverse environments
sedi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EBB79_17215
09102 Energy metabolism
00680 Methane metabolism
EBB79_17215
Enzymes [BR:
sedi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
EBB79_17215
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_8
Fer4_21
Fer4_9
Fer4_10
Fer4_16
Fer4_Nqo3
Fer2
Fer4_17
Fer4_18
Fer4_2
Fer4_15
Fer4_6
Fer4_4
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
AZV79433
UniProt:
A0A3T0N5V9
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Position
complement(3519331..3522105)
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AA seq
924 aa
AA seq
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MSTVNFILDGKEVSADAGLTIWEVANGRGLIIPHLCHKPAPGYRPDGNCRACMVEVEGER
TLVASCIREAADGMVVTTNSARAENARKMVVEMLIGDQPAREDSHDKSSHLWDMADLNGV
SESRFPKLEKARIPLLDDTHVAMSVNLDACISCNLCVQACREVQVNDVIGMAGRGHDAYP
VFDIADPMGASSCVACGECVQACPTGALMPSAVLDDAGQGDSKDFDSETESVCPFCGVGC
KVSLKVKDGKVKSVEGINGPANEGRLCVKGRFGFDYIHHPHRLTKPLIRRDDAPAKGLNV
DPGNLGTHFREATWDEALDLAAKGLVDLKDTHGGRSVAGFGSAKCTNEEAYLFQKFIRQG
FKHNNVDHCTRLCHASSVAALIENVGSGAVTATFNEIENSDVAIIIGSNPIENHPVAATY
FKQFTKRGGKLIVMDPRGVGMRRFAEEMVQFRPGADVSMLNAIMNVIVEEGLYDQSYIEK
YTENWEAEKAHLAQFTPEAMSEICGVSPEQLRRVARIYANGKAGLIFWGMGISQHIHGTD
NSRCLISLALMTGNVGKPGAGLHPLRGQNNVQGASDAGLVPMFLPDYQSVMDDGIRKSFT
DVWDSDDFSNEKGLTVTEIVDQVYAGNIKGMYIQGENPAMSDPDVDHARDAFAKLELMVV
QDIFLTETANYADIILPASTLYEKNGTVSNTNRQVQRVRPAVAPPGEAREDWSITTDLAQ
RIGLNWDYTEVSQVFDEMKLNMKSLDNITWERLKTETITYPSLHETDPGQAIVFGDGFPR
VDGRAKFTPASVIAPDEAPDAEYPMIMTTGRQLEHWHTGSMTRRSKVLDAVEPEANCSLN
PKTLRQMGVEPGDMVRLSTRRGSIEIMARADRAIAEDMVFVPFAYVEAAANVLTNPAIDP
YGKIPEFKFAAVRVEKIEGQIAAE
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgttaatttcatcctcgatggcaaagaagtttcggccgacgctggactgaca
atctgggaagtcgccaatgggcgtggactgattatcccgcatctgtgtcacaagccggcc
cccggctatcgccctgacggcaattgccgcgcctgtatggttgaggtcgaaggcgagcgg
actctggttgcctcctgtatccgcgaggcagcggacggtatggtggtcaccaccaattct
gcgcgcgcagaaaatgcccgcaagatggttgtggaaatgctgatcggggaccaacccgcc
cgtgaagattcgcatgataaatccagccatctctgggacatggcggacctgaacggggtt
tcggagtcacgtttccccaagctggagaaagcccgtattccgctgttggacgacacccat
gttgcgatgtcggtcaatctggatgcctgtatctcgtgtaacctgtgtgttcaggcctgc
cgtgaagtgcaggtcaacgatgtgatcggcatggctggtcgcggacatgatgcctatccg
gtgttcgacattgccgacccgatgggtgcctcatcctgtgttgcttgtggcgaatgtgta
caggcctgcccaaccggggcgctgatgccctcggctgttctggacgatgcagggcagggc
gattcaaaagatttcgacagtgaaaccgaaagcgtctgcccgttctgcggcgtcggttgc
aaagtctcgctgaaggtcaaggacggcaaggtcaaatcggtcgagggcatcaatggcccg
gcgaacgaaggccgcctgtgtgtgaaaggtcgctttggctttgactatatccaccaccca
caccggttgaccaaaccgctgatccgtcgtgacgatgccccagccaaggggttgaacgtt
gatcccggcaatctgggcacccatttccgcgaagcaacttgggatgaagcgctggatttg
gcagccaagggtctggttgacctgaaggacacccacggtggtcgttcggttgcgggcttt
ggctcggccaaatgcaccaatgaagaggcctatctgttccagaagttcatccgccagggg
ttcaagcacaacaacgtcgaccactgcacccgtctgtgtcatgcctcatccgttgcggca
ctgattgaaaacgttggttccggcgctgtgaccgcaaccttcaacgagatcgaaaactcg
gatgtggcgatcatcattggatccaacccgatcgagaaccatcccgttgcggcgacctat
ttcaaacagttcaccaaacgcggtggcaagttgattgtgatggatccccgcggtgtcggc
atgcgacgctttgccgaagaaatggtgcagttccgtcccggtgccgatgtgtcgatgctg
aacgcgatcatgaatgtgatcgtcgaggaaggcctgtatgatcagtcctatatcgagaag
tacacagagaactgggaggccgagaaggcccatctggcacagttcacccctgaagcgatg
tcggaaatctgtggtgtcagcccagagcagctgcgccgtgtcgcccggatctatgccaat
ggcaaagcggggcttatcttctggggcatgggcatttcgcagcacatccacggtaccgat
aactcgcggtgtctgatctcgctggcgctgatgaccgggaatgtcggcaaaccgggggcc
ggtctgcacccactgcggggtcagaataacgtgcaaggcgcctcggatgcgggtctggtg
ccgatgttcttgcctgattatcagtcggtgatggatgatggcattcgcaagtcgtttact
gatgtttgggacagcgatgatttcagcaatgaaaaaggcctgaccgtgaccgagatcgtg
gatcaggtctatgctggcaatatcaagggcatgtatattcagggtgaaaacccggcgatg
tcggacccggatgtggatcacgcccgcgatgcctttgccaagctagagctgatggtggtg
caggatatcttcctgacggaaacggcgaactacgccgacatcatcttgccggcctcgacc
ctgtatgaaaagaacggcacggtttccaacaccaaccgtcaggtgcagcgggtccgcccc
gccgtcgcgcctccgggtgaggcgcgcgaggattggtcaatcaccacggatctggcgcag
cgcatcgggctgaactgggactacaccgaggtgagtcaggtgtttgacgagatgaaactg
aacatgaagtcgctggacaatatcacctgggagcggttgaagactgagacaatcacctat
ccgtcgttgcacgagaccgatcccggtcaggcgattgtgtttggcgatggtttcccgcgg
gtcgatggtcgggccaagttcaccccggcctcggtgattgcaccggatgaagcgccggat
gccgaatacccaatgatcatgaccactggtcgccagctggagcattggcacactgggtcg
atgacccgtcgctctaaggtgctggacgcggttgagcccgaggcaaactgttccttgaac
cccaaaacgctgcgccagatgggtgtcgagcccggcgatatggtgcgactatcaacccgc
cgtggctcgatcgagatcatggcccgggcggatcgggcgattgccgaggatatggtcttt
gtcccctttgcctatgttgaggcagcggccaatgttctgaccaatccggcaatcgacccc
tacggcaagatccccgagttcaaatttgcagcggtgcgggtggaaaaaatcgagggtcaa
atcgctgctgagtaa
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