Parasedimentitalea marina: EBB79_17305
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Entry
EBB79_17305 CDS
T05780
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sedi
Parasedimentitalea marina
Pathway
sedi03030
DNA replication
sedi03430
Mismatch repair
sedi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EBB79_17305
03430 Mismatch repair
EBB79_17305
03440 Homologous recombination
EBB79_17305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedi03032
]
EBB79_17305
03400 DNA repair and recombination proteins [BR:
sedi03400
]
EBB79_17305
Enzymes [BR:
sedi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EBB79_17305
DNA replication proteins [BR:
sedi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EBB79_17305
DNA repair and recombination proteins [BR:
sedi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EBB79_17305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AZV79450
UniProt:
A0A3T0N5Z2
LinkDB
All DBs
Position
complement(3541885..3545397)
Genome browser
AA seq
1170 aa
AA seq
DB search
MTQSPRFIHLRTHTEYSLLEGALRLKKLPDLCKAAEMPAIAVTDTNNMFSALEFSVTLSG
AGVQPILGCQVDMTYQQAAPGEKPRTPASLVLLAQSEVGYENLMKLNSCLYLDKGHQLPQ
VTIDELEQYSAGLICLTGGPNGPIGLLLQQGQLPAAQEMMQRLKSIFPDRLYVELQRHPG
EGGQPEAEKTTERGHIEMAYAMDLPLVATNDVYFPKTEMYEAHDALICISEGAYVDQAEG
RRRLTAQHYFKSQQEMVTLFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RQANEGLQARLAVIPHAVTVEEYQKRLDFELDIIEGMGFPGYFLIVADFIHWGKEQGIPV
GPGRGSGAGSLVAYALTVTDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QQKYGRDRVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKLIPVEGVKPMSIADSLK
EEPRLREEARNEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPIDELVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQSAVDLIKGEGRDLHIAADGTQLYDPPTGAV
NEINAIPLDDIPTYKLYAAAKTVAVFQVESSGMMDALKRMKPNCIEDIVALVALYRPGPM
ENIPTYCEVKNGLKEIESVHPLIDHLLAETQGIIIYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEKGAAENGVPPKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMGGVMNCDIHLTDKLAVYFEEVRKGLGLPYVPPCVNRSDAMFNVVNGE
LVYALGALKNVGVEAMKLVTAARRADGGDRPFVNLFDFARRVDLKKVGKRPLEMLARAGG
FDQLDPNRRRVFDSLEPLVGYSSAIHEQKNSNQVSLFGDAGEDLPEPRLSGTPDWLPAER
LSEEFKAIGFYLSGHPLDDYMPALKRKGAMTLDEVMEKARRGPFLAKMAGVVAGRQERKS
ARGNRFAFAQLSDTTGGFEVTLFSEALEKSREHLETGAKVVLTAEATMESDQLKLLARSV
GPIDAAVADAGNSSLRVYITEAAAVSTVATVLEEARAAAKNASRGEVLMYLQDPTLPGDV
ELDLGQYFPINPQIKGAIKSLDGVLDVEEI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacccaatctccccgattcattcacctgcgcacccacactgaatattcccttctggag
ggtgcactgcggctgaaaaagctgccggatctctgcaaggctgcagagatgccggccatt
gcagttaccgataccaataacatgttctcggcactggagttttccgtcacgctgtctggc
gccggcgtccagcccatcttgggttgccaggtggatatgacctatcagcaggccgccccg
ggcgaaaagccaaggaccccagcctcattggtgctgctggcgcagtccgaagttgggtat
gaaaacctgatgaagctgaactcttgtctgtacctggacaaggggcaccagttgccgcag
gtgacaattgacgagctggaacaatactctgccggcttgatctgtctgaccggtggtccc
aatggcccgattggtctgttgctacagcagggtcaactcccggctgcgcaagagatgatg
caacggctcaaatcgattttccccgaccggctgtatgttgaattgcaacgtcacccgggg
gaaggcggtcagcccgaggctgaaaagaccaccgaacgcggccatatcgaaatggcctat
gcgatggatctgccccttgtcgcgaccaatgacgtctatttccccaaaaccgaaatgtac
gaggcgcatgatgcgctgatctgtatttcagagggcgcttatgtcgatcaggccgaaggc
cgccgccgcctgactgcgcagcattacttcaaaagccagcaggaaatggtaaccctgttt
gctgacctgcccgaagccattgagaatacggttgagatcgccaagcgctgcgcctttatg
gcttatcggcgcgatccaatcctgcccaagttcgccgatgacgaggttgccgagctgcgc
cgtcaggccaacgagggcttgcaggcccggctggcggtgatcccccatgcggtgactgtt
gaagagtaccagaaacggctggattttgagctcgacattatcgagggcatgggtttcccc
ggatatttcctgattgttgccgacttcatccactggggtaaggaacagggcattccggtt
gggccggggcgggggtcgggtgcggggtcactggtggcctatgcgctgacggtgaccgac
ttggatccgctgcgctattcgttgctgtttgagcgtttcctgaacccggaacgggtgtcg
atgcccgacttcgatatcgatttttgcatggaccgccgcgaagaggtgatccgctatgtg
cagcagaaatatggccgtgaccgggtgggccagatcatcacctttggtgcgctgttgtcc
aaggcggcggtgcgcgacattggccgggtgctgcagatgccatacgggcaggtggaccgt
ctgtccaagctgatccctgttgagggcgtcaagccgatgtcgattgccgacagcctgaag
gaagaacctcgcctgcgcgaagaggcccgcaacgaagaggttgtggatcggttgttgacc
tatggccagcaggtcgaagggttgctgcgcaatgcctcgacccacgcggcgggggtggtg
attggagaccggcccattgacgagctggtaccgctgtatcaggacccgcgctctgacatg
ccggcaacccagttcaacatgaaatgggtggaacaggccggtctggtcaagtttgacttt
ctgggtctgaaaacactgaccgtgattcaaagtgcggtggacctgatcaagggcgagggg
cgcgatctgcatatcgcagcggacggcactcagctgtatgatccaccgacaggcgcagtg
aacgagatcaacgccatcccactggacgatattcccacctataaactctatgcagccgcc
aaaacggtggccgtgttccaggtggaatccagcggcatgatggatgcgctgaagcggatg
aagcccaactgcatcgaggacatcgtggcgctggtggcgctgtatcgtcccggcccgatg
gagaacattccgacctattgtgaggtcaagaacgggctcaaggaaattgaatccgtgcac
ccgttgatcgaccatctgctggccgaaactcagggcatcatcatctaccaggaacaggtg
atgcagattgctcaggtgatggcgggttatagcctgggcggcgcggatctgctgcgccgg
gcgatgggtaagaagatcaaagaggcgatggacgccgagcggcctaaatttgaaaaaggt
gctgccgaaaatggcgtgccgccgaaaaaggcctcggaagttttcgaccttttggaaaaa
ttcgccaactacggcttcaacaaaagccacgcggcggcttatgcggtggtatcctaccaa
actggctggctaaaggcgaaccacccggtagaattcatgggcggggtgatgaattgcgat
atccacctcactgataagctggcggtctactttgaagaggtcagaaaggggctgggccta
ccctatgtgccgccctgcgtgaaccgctctgatgcgatgttcaacgtggtcaacggcgag
ctggtctatgcgctgggcgcgttgaaaaacgtcggcgtcgaggcgatgaagctggtgacg
gcggcccgtcgcgcggatggtggtgaccggccctttgtgaacctgtttgattttgcccgc
cgggtggatttgaaaaaggttggcaaacggccgcttgaaatgctggcgcgggctggcggg
tttgatcagttagatccaaaccgccgccgggtgtttgacagtctggagcccttggtcggc
tactcgtctgcgatccatgaacagaagaattccaatcaggtgtcgctatttggcgatgcc
ggcgaggatctgccagaaccccgtctgtccggcaccccggactggttgcccgctgaacgg
ttgagcgaggaattcaaggcgattggcttttacctgtctggtcacccgctggacgactat
atgcccgcgctgaaacgcaaaggcgcgatgaccctggacgaggtgatggagaaagcccgg
cgtggtccgtttctggccaagatggcaggtgttgtggccggtcggcaggaacgtaaatcg
gcgcgcggcaaccggtttgcctttgcccaactgtcggacaccaccggcggctttgaggtg
acgctgttttccgaagcgctagagaaaagccgcgaacatctggagaccggcgccaaggtg
gtgctgacggccgaggccacgatggaaagcgaccagctgaagctactggcgcggtctgtt
ggtccaattgacgccgccgtggccgatgcgggcaacagcagcctgagggtttacatcacc
gaggcggcagcggtgtcgactgtggccacagtgctggaagaagcccgcgccgccgccaaa
aacgccagccgtggcgaggtgctgatgtatctgcaggacccgacattaccgggcgatgtt
gagctggatctgggccagtatttccccatcaacccgcagatcaagggcgcgattaagtca
cttgatggcgtgctggacgttgaggagatttaa
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