Parasedimentitalea marina: EBB79_17980
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Entry
EBB79_17980 CDS
T05780
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
sedi
Parasedimentitalea marina
Pathway
sedi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EBB79_17980 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedi03400
]
EBB79_17980 (uvrC)
DNA repair and recombination proteins [BR:
sedi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EBB79_17980 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH_5
GIY-YIG
UVR
HHH_2
IMS_HHH
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
AZV79577
UniProt:
A0A3T0N6E9
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Position
complement(3691292..3693163)
Genome browser
AA seq
623 aa
AA seq
DB search
MTDSPPFEPPVPETGYGVVLGYLKTLDGSPGVYRMLDAENRVLYVGKARNLRARVSNYSR
PGNSPRIERMIALTSSMMFLTTRTETEALLLEQNLIKQLKPKYNVLLRDDKSFPNILLGK
THDYPQIKKHRGARKEKGSYFGPFASAGAVNRTLNQLQKAFLLRNCSDSMFESRTRPCLQ
HQIKRCSAPCTGAITREDYADSVSDAERFLSGRSTKVQEDLAAQMMAASEAMEFERAAAL
RDRIKALTQVQTAQGINPRGVAEADIIGLHMEGGQACVQVFFIRANQNWGNQDFYPRIGA
DVSPAEVMEAFIGQFYDNKEPPRQLILSDGIENDDLMVEALSGKVTYKVEIIVPQRGEKA
ELIAFAVRNARESLARRMSESATQAKLLRGLAEAFDLDGPPKRIEVYDNSHIQGTNAVGG
MIVAGPEGFMKNAYRKFNIKGDDLTPGDDFGMMKEVLHRRFSRLQKEDPDRSKGHWPDLL
LIDGGAGQVSAVAQIMAEHSVDDIPMVGVAKGVDRDHGKEEFHRMGQRPFALQRNDPVLY
FVQRMRDEVHRFAIGTHRAKRAKAISATPLDDVPGVGASRKRALLAHFGSAKAVSRANLS
DLKVVDGVSAALAQRIYDYFQDK
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcccccccttttgagccgccagtaccagaaaccggctacggtgttgtcctg
ggatatctgaagacgttggatgggtctcccggcgtgtatcggatgctcgatgccgagaac
cgggtgctctatgtgggcaaggcccgcaatctgcgggcacgggtgtcgaactacagccgc
ccaggcaatagccctcggattgagcggatgatcgcactgaccagttcgatgatgttcctg
accacaagaactgagaccgaggcgctgctgctggagcagaacctgatcaagcagttaaaa
ccgaaatacaatgtgttgttgcgcgatgacaaaagtttcccgaacatcctgttgggcaaa
acgcatgattatccgcagatcaagaagcaccgcggcgcgcgtaaggaaaagggcagctat
ttcggaccctttgccagcgccggggcggtgaaccgaaccctgaaccaactgcaaaaggca
ttcctgctgcgcaactgctcggattcgatgttcgaaagccgcacgcgaccttgtctgcaa
caccagatcaagcgctgctcggcgccatgtaccggggcaatcacccgcgaggactacgcc
gatagtgtcagtgatgccgaacgctttctgtcgggccgttcgaccaaggtgcaagaggat
ctggcggcgcagatgatggcggcctcggaggcaatggagttcgaacgtgccgctgccctg
cgggaccggatcaaggcgctgacacaggtgcagaccgcccagggcatcaacccgcgcggc
gtggccgaggcggatattatcgggctgcatatggaaggcggtcaggcctgcgtgcaggtc
ttctttattcgggccaaccagaactggggcaatcaggacttctacccgcgcatcggtgcg
gacgttagcccggccgaggtgatggaagcctttatcggccagttctacgacaacaaagag
cccccccggcaattgattctgtcggacggtatcgaaaacgacgacctgatggtcgaagcg
ctaagtggcaaggtcacttataaagtcgaaatcatagttccacagcgcggcgaaaaggct
gaactgattgccttcgcagtccgcaatgcccgcgaatctttggcgcgccgcatgtccgag
agcgccacccaggccaagctgttgcgggggctggccgaggcctttgatctcgacggtcct
cccaagcggatcgaggtctatgataactcgcacattcaaggcaccaatgcggtcggcggt
atgatcgtggccgggcccgaaggtttcatgaaaaatgcctaccgcaaattcaacatcaaa
ggcgatgacctgacgccgggcgatgactttggcatgatgaaggaggtgctgcaccgccgg
ttttcacgcctgcagaaagaagacccggaccgcagtaaggggcactggccggatctgctg
ttgatcgacggcggggccggccaggtctcggcggtggcacagattatggcagagcacagc
gtcgatgacattccaatggtgggggtggccaaaggtgtcgaccgtgaccacggcaaggaa
gagttccaccgcatggggcagcgcccctttgctctgcaacgcaacgatccggtcctgtat
tttgttcaacgcatgcgcgacgaggtgcaccggtttgcgattggcacccaccgcgccaaa
cgcgccaaggcgatcagtgcaacaccattggacgacgtgccaggtgtcggggccagccgt
aagcgagcgctactggcgcatttcggcagcgccaaggcagtaagccgtgccaacttatcg
gacctcaaagtggttgatggcgtttctgcagcactggcgcagcgcatttatgactatttc
caggacaaatga
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