Parasedimentitalea marina: EBB79_20150
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Entry
EBB79_20150 CDS
T05780
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sedi
Parasedimentitalea marina
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedi03032
]
EBB79_20150
03036 Chromosome and associated proteins [BR:
sedi03036
]
EBB79_20150
03400 DNA repair and recombination proteins [BR:
sedi03400
]
EBB79_20150
DNA replication proteins [BR:
sedi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EBB79_20150
Chromosome and associated proteins [BR:
sedi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EBB79_20150
DNA repair and recombination proteins [BR:
sedi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EBB79_20150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AZV79966
UniProt:
A0A3T0N7E8
LinkDB
All DBs
Position
4134689..4134976
Genome browser
AA seq
95 aa
AA seq
DB search
MSKPMTKTQLVAALAEDMGSDKKAAGAALEAVCDLITREVSGGGAVTLPGVGKIYCRERP
EREVRNPATGEKFMKEADKVVKMTIAKALKDSVNG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccaatgacaaaaacccagctcgttgccgctctggccgaagacatgggcagc
gataaaaaagccgcaggcgcagctctggaagccgtttgtgacctgatcacccgcgaagta
tccggcggcggtgctgtcacacttcccggcgttggcaagatctattgccgcgagcgccca
gagcgcgaagtgcgcaatcctgccactggcgaaaaattcatgaaagaagccgacaaggtt
gtcaaaatgacaatcgccaaagcgctgaaagacagcgttaacggctaa
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