Parasedimentitalea marina: EBB79_22455
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Entry
EBB79_22455 CDS
T05780
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
sedi
Parasedimentitalea marina
Pathway
sedi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sedi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EBB79_22455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedi02000
]
EBB79_22455
Transporters [BR:
sedi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
EBB79_22455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Ependymin
Hemocyanin_C
Motif
Other DBs
NCBI-ProteinID:
AZV80720
UniProt:
A0A3T0N9K6
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All DBs
Position
pW43B:complement(12204..13313)
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AA seq
369 aa
AA seq
DB search
MQDKKFMRETLKEGAEAFQSGKLSRRSFLTLCAMAGVATSAVMVGDAEAAAKQIVMWNWG
GQSEECHGNAIGQPFTEQTGMPLRFDTSGPLQGKIKEMVDSGNVTADVCDADLFDAVALG
PSGHLEAIDYNVVDKAKSLPQYTLEYGVSIILYGYAFVYDTEVFGDNPPTSWADFFDIAK
YPGKRSLYKWANGSLEAALMADGVDKDALYPLDMERALAKIKSIKDDSLYWGSGSAAHSM
VVNGEVSMGMVWQNRGRNIENDTDGRYKLVMNQALAMPGAYIVPKGNPAGRDMVMKFISI
AQEPAAQLELLNCLGMTPSNPEVFADIPEDQQPYAIASALNIDKIAFSDPEWWGENSGDA
VNAFLEAIS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacaaaaagttcatgcgtgagaccctgaaagaaggcgccgaagcgtttcaatca
ggaaagttgagccgccgctcgtttctgactctttgtgcgatggctggcgttgcaaccagc
gctgtcatggttggtgacgcggaagccgccgccaaacaaatagtcatgtggaattggggc
gggcaatcagaagaatgccatggcaatgcaattggtcagccatttaccgagcagaccggc
atgccgctgcggtttgacacctctggcccgctacagggtaagatcaaagagatggtcgac
agtggcaatgtcaccgctgacgtgtgtgatgccgatttgtttgatgccgtggctctagga
ccgtcgggccacctcgaggccattgattacaatgttgtcgacaaggctaaatccttgccg
cagtacacattggagtatggggtttcgataatcctctacggttatgcctttgtctatgac
accgaagtttttggcgacaatccaccaacctcttgggcggacttctttgacatcgcaaaa
taccctggcaaacgctcgctgtacaaatgggccaatggctcgcttgaggccgcgttaatg
gcggatggcgttgacaaagatgcgttgtacccgctggacatggaaagggcattggccaag
atcaaatcgatcaaggacgacagcctgtactggggttcaggatccgcagcgcattctatg
gtggtgaatggcgaagtttcgatggggatggtctggcagaaccgcgggcgcaacatcgaa
aatgataccgatgggcggtataaactggtgatgaaccaagctttggcaatgccgggggcc
tatatcgtgcccaagggcaacccggctggtcgcgacatggtgatgaagtttatctcgatc
gcgcaagagcctgcggcgcaattagaactgttgaactgtctcggcatgacaccttctaat
ccggaagtctttgccgacattcccgaggatcagcaaccctatgccatcgcgtcagcactc
aacatcgacaaaatcgcattcagcgaccccgaatggtggggcgaaaacagcggcgatgcg
gtgaatgccttcctcgaggcgatcagctaa
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