KEGG   Parasedimentitalea marina: EBB79_24650
Entry
EBB79_24650       CDS       T05780                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
sedi  Parasedimentitalea marina
Brite
KEGG Orthology (KO) [BR:sedi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sedi02044]
    EBB79_24650 (tssF)
Secretion system [BR:sedi02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EBB79_24650 (tssF)
SSDB
Motif
Pfam: T6SS_TssF IFT52_central
Other DBs
NCBI-ProteinID: AZV81070
UniProt: A0A3T0NAK5
LinkDB
Position
pW43D:104917..106794
AA seq 625 aa
MDTRLLEHYENELNYLRDMGGEFADAYPKIASRLGMEGIEVLDPYVERLLEGVAFLSARV
QLELQLQYPNFTSNLLEIIYPHYLAPTPSMMIAAFKPDITNSAVKSGYVLPRHSVLRSRL
TEGEQTACEFRTASEMTMWPIEITEADYIDGRGELVAAGVASGVDARAGIRLRLRRSDGE
AISDLAMDNLTLYLSNEAGNSWPLLELLCTQVQGLVARSTDRRADWHMPLPGGQIVQRGF
EADEALLPAPRQVFDGYRLLQEFFAMPERFRFVELQGLRPALERAKGPEVDIYILLREGM
SEIAPVVTPEVFTLNAVPAVNLFEKRCDRVQIAPHDTEHHVVPNRTAGLDFEIYSLNSVT
GISGEGEDDVIFRPFYSATDFTASGESFPAYYTIKRRMRRRSEKERLRGVRSSYLGSEIY
LTLVDRSQAPYAADLEQLAVKALCTNRDLPMLLATGDDNVFHLPEGGPVTSIMLPVSPTR
PRPTLAQGDTAWRLISHLSLNYATIAETGKGQSAAALRELVGLYAPLGNRVTEKQMEGIV
SISTRPIVRRMSDEVLSTAVRGLEITLGFDESFFEGSNIYALGAVLERFLRRYSTINSFT
ETVLKTEKRGEIARWRPEKGLGRIL
NT seq 1878 nt   +upstreamnt  +downstreamnt
gtggatacacggcttctggagcactatgaaaacgagctgaactatctgcgcgacatgggc
ggagaatttgccgacgcctatccaaaaattgcttcacgtctggggatggaaggcatcgaa
gtcctggatccctatgtggagcggctgcttgagggggtggcgtttctgtcggcgcgggta
cagctggaactgcagctgcaatatcccaatttcacctcgaacctgctggaaattatttat
ccccactatctggcgcccaccccgtcgatgatgattgcggccttcaaaccagacatcacc
aactcggccgttaaaagcggctatgttctgccgcgacattcggttctgcgcagtcgcctg
accgagggcgagcaaaccgcctgtgaattccgcaccgcttcggaaatgaccatgtggccg
atcgagatcaccgaagctgactatatcgatggccgcggcgaattggttgcggcgggggtg
gccagtggtgtggatgcccgggccggtattcgcctgcggctgcggcgcagtgacggcgag
gcgatctcggatctggcgatggataacctgacgctgtatctcagcaatgaggcgggcaat
agctggccactgctggaactgctgtgcacccaggtgcaggggttggtggcgcggtccact
gacagacgtgccgattggcacatgcctttgcctggcgggcagattgtacagcgcgggttc
gaggcggacgaggccctgttgcccgcgccgcgacaggtgttcgatggctatcgtctgctg
caagaattctttgccatgcccgaacggttccgttttgtcgagttgcagggtctgcgcccg
gcactggaacgggccaaggggcccgaggtggacatctatatcctgctgcgcgagggcatg
agcgagatcgccccggttgtcacgcccgaggtgttcaccctgaacgcggtgcctgcggtc
aacctgttcgaaaagcgttgtgaccgggtgcagatcgcgccgcatgacaccgaacatcac
gtggtgcccaaccgtactgcgggcctggattttgagatttacagcctgaactctgtcacc
ggcatcagtggcgaaggcgaagacgacgtgatctttcgtccattctattcggccaccgat
ttcaccgcctcgggggaaagttttccggcctattacacgatcaaacgccgcatgcgtcgg
cgctcggaaaaggaacggctgcgcggcgtgcgcagttcctaccttggctccgaaatctat
ctgaccctggtggatcgatcacaggcaccctatgcggctgatttggaacaattggcggtt
aaggccctgtgcacaaaccgcgatttgcctatgctgctggcgacgggcgatgataatgta
tttcacctgcccgaaggcggaccggtgacatcgatcatgctgccggtgtcgccgacgcga
ccgcgcccaaccctggcccaaggcgatacggcctggcggctgatctcacatctcagcctg
aactacgccaccattgcggaaaccggcaagggccagtctgccgccgccctgcgtgaattg
gtcgggctatatgcgcctttgggcaaccgggtgaccgaaaagcagatggaggggatcgtg
tcgatttcaacacgtcccatcgtacgccggatgagcgacgaagtgctgtcgacagcggta
cggggcctggaaatcactttggggtttgacgaaagcttttttgagggcagcaacatctac
gcgcttggcgctgtactggagcggtttttacgccgctattccaccatcaactcgtttacc
gaaactgttttgaaaactgaaaaacgcggggaaattgcaagatggcgaccggaaaaaggt
ctgggccggatactctga

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