Sedimentibacter sp. MB35-C1: RBQ61_00915
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Entry
RBQ61_00915 CDS
T10438
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm03420
Nucleotide excision repair
sedm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBQ61_00915
03430 Mismatch repair
RBQ61_00915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedm03400
]
RBQ61_00915
Enzymes [BR:
sedm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBQ61_00915
DNA repair and recombination proteins [BR:
sedm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBQ61_00915
MMR (mismatch excision repair)
Other MMR factors
RBQ61_00915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
UvrD-helicase
UvrD_C_2
SLFN-g3_helicase
DEAD
UvrD_C
PhoH
Viral_helicase1
ResIII
AAA_16
AAA_30
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WMJ77523
UniProt:
A0AA51DAL1
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All DBs
Position
complement(189106..191346)
Genome browser
AA seq
746 aa
AA seq
DB search
MENYEQEFKIELAHYNEILDVIHEQLEDAKKVNSKSIEALRETNREMWENASHSADDFDG
AAQLSQFYQPLASNTLAIESSAKKVQLLERLLQSAYFARIDFCSVSKEQYEKIYIGRGTL
FNDQEKRIIIYDWRSPIASLFYRFETGNAYYDAPGGRITGDIGLKRQYEIKKGVFEYFFD
ADVQIADEFLRKMLSENTSSKMKTIVETIQKDQDIAIRDVSHDLLMVQGIAGSGKTSIAL
HRVAYLKYQGLSSRLKDIIILSPNTLFEQYISDVLPELGEDEVKSVVFDDLVTNSLPDKP
AFQSRYNQTEMLISFTSSAAKALQKQSMEFKMSRAFVRIINRYVDSLSTSHIVFPDIEYD
GKIVFTGQHLKERLLQMNRNISLAVKLSHLRRYIFDKIHEMRKDRMPKLLRQAREDPEHP
FDWEEYARELSIEESTLLAQKVDEFVKLDAIALYKKLINTDGLLLSLSAEIGLPNNIEEI
LTYSKKQLAESTLQNEDALAVTYLQLLISTNDNYRNIRQVVVDEAQDYYDFHFEILKRLF
PNARYTILGDINQTIEKKENMSLYERITEILQPCSSCLMVMNKSFRCTKEILSFSMQFLD
DSTLFESFNRSGDMPQVIEATEMDLLDEKIIEEVIYSKNQGYGSIGIICKDAQQAEFLYM
RLKDKLSLHLVRSGENLNTAGAFIIPITMSKGLEFDSVLIYGVDKKHYHSVNDKKLLYIA
STRALHRLNLFYTGEKSYLVQGGIRI
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaactatgaacaggaatttaaaattgaacttgctcattacaatgagattcttgat
gtcattcacgaacaattggaggatgctaaaaaagtcaactccaaaagcatagaagcctta
agagaaacaaaccgagaaatgtgggagaatgcctcccattccgcagatgattttgatgga
gcggctcagttaagccaattttatcaaccacttgccagcaatactttggcaatagaatcc
agtgcaaaaaaagtacagctgctggagcgattattgcaatcggcctattttgcccggatt
gatttttgctctgtaagtaaagaacagtacgaaaaaatctacattggcagagggacatta
tttaatgatcaggagaaaagaattatcatctatgattggcgttctcctattgcaagcctg
ttttaccgttttgaaaccggaaatgcatattatgatgcaccgggtggccgcattaccgga
gatattgggctgaaacggcaatatgaaataaaaaaaggagtctttgagtacttttttgat
gccgatgttcagattgcagatgagtttttacgtaaaatgctctctgaaaacacatccagc
aaaatgaaaaccattgtagaaactatccaaaaagatcaggatattgccatccgagatgtg
tctcacgacttgcttatggtgcaaggcattgccggaagcggtaaaacctccattgctttg
catcgtgtggcttacctcaaatatcagggtctttcaagccgactgaaagatattattatt
ctatcccctaacactctatttgaacaatatatttccgatgttttgccggagctgggtgag
gatgaagtgaaatctgttgtgtttgatgatttggtaacgaatagtctgccggataagcca
gcatttcagtcccgctacaaccaaaccgaaatgctgatttccttcacatcatctgctgcg
aaagctctgcaaaagcaatcaatggaattcaaaatgtccagagcctttgtcagaataata
aacagatatgtagatagcctgtcaacatctcatatcgtctttcccgatattgagtatgat
ggaaaaatagtttttacagggcagcatttaaaagaacgtctgctgcaaatgaatagaaat
attagtctagcggtaaaactgagccatttgcgccggtatatctttgataaaatacatgag
atgcgtaaagatcggatgcctaaactgttgcggcaagcaagggaagaccctgagcatcct
tttgattgggaagaatatgcaagagagctgtctattgaagaaagcactcttctcgctcaa
aaagttgatgagtttgtcaaattggatgctattgcgctttacaaaaaattgataaacaca
gatggtttattgctttctctttcagctgaaattggattgccaaacaacattgaggaaata
ctgacttactcaaagaaacagctcgcagaatctacgcttcaaaatgaggatgctttggct
gtaacctatttgcagctattgatcagtacaaatgataactacagaaacatccggcaggtc
gtagtggatgaagcacaagactactatgattttcattttgagatcttaaaacgattgttt
ccaaatgcacggtataccatattgggtgatatcaatcaaacaattgaaaaaaaggaaaat
atgagcttgtatgaaagaatcacggagatcttgcaaccgtgcagttcctgcttaatggtt
atgaataaaagctttcgatgcaccaaagagatactttcatttagtatgcagtttttggac
gatagtactctatttgagagttttaatcgcagtggtgatatgccacaggttattgaagct
actgaaatggatttgcttgacgagaaaattatcgaagaagttatttacagcaaaaaccaa
ggttatgggtctatcggaattatatgtaaagatgcacagcaagcagaatttctttacatg
cgtttaaaagataaattgagccttcatctggtacgctcgggtgaaaacctaaatacagca
ggagcgtttattatccctatcaccatgtcaaaaggattggagtttgattctgtcctaatt
tacggtgtagataaaaagcattatcattcagtcaatgataaaaagctgttgtatatcgcc
agcacccgtgctctgcatcgactcaatctgttttatacaggtgaaaaaagttatttggtt
caaggaggtatcagaatatga
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