Sedimentibacter sp. MB35-C1: RBQ61_01895
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Entry
RBQ61_01895 CDS
T10438
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm00300
Lysine biosynthesis
sedm00470
D-Amino acid metabolism
sedm01100
Metabolic pathways
sedm01110
Biosynthesis of secondary metabolites
sedm01120
Microbial metabolism in diverse environments
sedm01230
Biosynthesis of amino acids
Module
sedm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBQ61_01895 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBQ61_01895 (lysA)
Enzymes [BR:
sedm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RBQ61_01895 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WMJ77702
UniProt:
A0AA51D9Z6
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Position
complement(395825..397123)
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AA seq
432 aa
AA seq
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MIEDIKYNTLYFDGCNTVELAKKYGTPLYVMSENAIENKCREIRETFLGRYKRTRAAYAA
KAFLTLAMCKIIEKEGLCMDVVSGGELYTAIKADFPPEKIEFNGNNKSEEELELAIEYNI
GRIIVDGLDELSLIEEICSKKGKKMNILYRITPGVKSDSHDYIVTGKKDSKFGIPLDDEV
IFPAIEQAINSRYVNFMGFHFHVGSQLHNNESHLKALDVALKLIKDTKEKYSYTTPEINI
GGGFGIKYTDADDKKSYEYFLDPMMKKIEEFSKNMEIVRPEVVIEPGRSIVGEAGITLYT
IGTVKDIKGIRKYVSVDGGMTDNIRPALYQAKYEGIVANKAEEAKTDVVTICGKCCESGD
ILIKDAKIAPAERGDIFAVFSTGAYGYTMSSNYNKNPFLATVLVKNGKSCIIVKRQSYDH
MIANEVIPESLN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacattaaatataacacgctttattttgacgggtgcaatacggttgagttg
gcaaaaaaatacggtacgcctttgtatgtaatgagtgaaaatgcaattgaaaataagtgc
agagaaataagagaaacatttttgggcagatataaaagaacaagagccgcctatgctgct
aaggcttttttgaccttggcaatgtgcaaaataatcgaaaaagagggactttgcatggat
gttgtttccgggggggaattgtatacggcaatcaaggctgattttccgccagaaaaaata
gaatttaatggaaataataaatccgaagaagaattggagcttgcgattgaatacaatata
ggaagaataatagtcgatggacttgatgagttgagccttatagaagagatatgcagcaaa
aaaggcaaaaaaatgaatatattgtatagaataactcctggcgttaagagtgactctcat
gattatatagttacaggtaaaaaagactcgaaattcggcataccgcttgatgacgaggtt
atatttcccgcaattgaacaagcaataaattcaagatatgttaactttatgggatttcat
tttcatgtagggtctcagcttcataacaatgagtctcatttaaaagctcttgatgttgca
ttaaagttaataaaagatactaaagaaaaatatagttatactacaccggaaataaatatc
ggcggtggttttggaataaaatacacagatgctgacgataaaaagtcctatgagtatttt
cttgaccctatgatgaaaaaaattgaagaattttcaaagaatatggagattgtaagacct
gaggttgtaattgaaccgggcaggagcattgtgggtgaagcaggtataacattgtacaca
ataggtaccgttaaggatataaaaggtataagaaaatatgtttctgttgacggaggtatg
acggataatatcagacctgctctctaccaggctaagtatgagggaatagtagcgaataaa
gcggaagaggcaaagactgacgtggttacaatatgcggcaaatgctgtgaatcaggagat
atactcataaaggatgcaaaaatagctcctgctgaaagaggagatatatttgcagtgttt
tcaacaggggcatacggatataccatgtcaagcaattataacaagaatccatttttggca
acggtgctcgttaaaaacggaaaatcctgcataatagtaaaaaggcaaagttacgaccat
atgatagctaatgaagtgattccagaatcactaaactaa
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