Sedimentibacter sp. MB35-C1: RBQ61_02205
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Entry
RBQ61_02205 CDS
T10438
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBQ61_02205 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sedm03400
]
RBQ61_02205 (uvrB)
DNA repair and recombination proteins [BR:
sedm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBQ61_02205 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBQ61_02205 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
UB2H
DEAD_2
DUF87
Tox-HDC
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMJ77764
LinkDB
All DBs
Position
complement(467603..469567)
Genome browser
AA seq
654 aa
AA seq
DB search
MGEFKIKSDFKPTGDQPEAIKKIVSGLENNLKYQTVLGVTGSGKTFTMANIIEKIQKPTL
VLAHNKTLAAQLCSEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDEIDK
LRHSATASLFERKDVIIVASVSCIYGLGSPIDYENLVISLRPGMQKDRDQTIRKLIEIQY
KRNDISFTRGTFRVRGDTLEIFPASSSENAIRVEFFGDEIDRITEINTVTGEILGRRNHI
SIFPATHYATTEENVNRAVVSIRKELQEQLKYFESENKLLEMQRLEQRTNYDLEMLQEMG
YCNGIENYSRHINNLEPGTRPYTLLDYFPKDFLMIIDESHVSVPQVRGMYNGDRARKTTL
VNYGFRLPSALDNRPLKFDEFENIINQVVFVSATPGPYEAEHSQNTAEQIIRPTGLLDPP
ISVRPVENQIDDLMNEIKKSTDKNQRVLVTTLTKKMAEDLTLYFKNAGIRVRYLHSDIDT
MERMQIIRDLRIGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTVGRA
ARNSDGRVIMYADNMTGSMERAISETNRRRKIQDKYNKDNNITPMSVKKGVRNVIEATKV
AEDEAKYTPKSKKITDMASYIIELEKEMRIAAENLEFEKAAKLRDEIKELKTII
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaatttaaaataaagtcggattttaaacctaccggagatcagccggaggcaata
aaaaaaattgtgtcaggattagaaaacaatttaaaatatcagactgttttaggggtaaca
ggctcaggaaagacctttaccatggcaaatataattgaaaaaattcagaagccgactctt
gttcttgctcataacaagacattggctgctcagctgtgctctgaatttaaagagtttttt
cctgacaatgcggtagaatattttgttagctactatgattattaccagcctgaagcatat
gtgccaagcagtgatacctttatagaaaaagatgcatccataaatgatgaaattgataaa
ctgagacactctgctactgcatcactttttgaaagaaaagatgttattatagtagccagt
gtatcatgcatatatggattgggaagtcctattgactatgaaaatctggtcatatcatta
agacccggcatgcagaaggatagagaccaaacaattagaaagcttattgaaattcagtat
aaaagaaatgatataagctttacaagaggaaccttcagagtaagaggagatacgcttgaa
atatttcccgcatcctcgtcagagaatgcaataagagtggaatttttcggcgatgaaata
gacagaataactgaaataaatactgtaactggagaaattttaggaagacgaaatcacata
tctatatttcctgcaacccactatgccactacagaagaaaatgtaaacagagctgttgtc
agtatacgaaaagaactacaggagcagctcaaatattttgaaagcgagaacaagcttttg
gagatgcaaaggcttgagcagagaactaactatgacctggaaatgcttcaggaaatggga
tattgcaacggaatagaaaattattcaaggcatataaataatctggagccgggaacaagg
ccttatacacttcttgattattttccaaaagattttttaatgattatagatgaatcgcat
gtttctgttcctcaagtaagaggaatgtacaacggagacagggcgagaaaaacaacactt
gttaattacgggttcaggcttccctcggcattagataacaggccgctgaagtttgacgaa
tttgaaaatataataaatcaagttgtatttgtcagtgcgacaccgggaccgtatgaggcc
gagcattcgcagaatacagccgaacaaataatacgtcctacaggactgcttgatcctcct
atttctgtccgacctgttgaaaatcaaattgatgatttgatgaatgaaatcaaaaaatca
acagataaaaatcaaagggtgcttgttacgactctcactaagaaaatggctgaggatttg
acgctttactttaaaaatgcgggaatacgtgtaagatatcttcactctgatatagatact
atggagaggatgcagattatcagagacctgcgcataggagagtttgatgttctcgtgggc
ataaacctgctgagagaaggattggaccttccggaggtatctcttgtggcgattcttgat
gctgacaaggaaggtttccttcgatctgaaacatcgctcatacagacagtgggaagagct
gcaagaaattcggacggcagagttataatgtacgccgataatatgaccggttcaatggaa
agagccataagtgaaacaaacagaagaagaaaaatccaggataaatataataaagacaat
aatattactcctatgtcggtcaaaaaaggagtaagaaatgtgattgaagcgacaaaggtg
gctgaggatgaagcgaagtacacgcctaagagcaaaaaaatcacagatatggcttcttat
attattgagcttgaaaaggaaatgagaattgctgcagaaaaccttgaatttgaaaaagct
gccaagctgagagatgaaattaaggaactaaagactataatataa
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