Sedimentibacter sp. MB35-C1: RBQ61_03460
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Entry
RBQ61_03460 CDS
T10438
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sedm Sedimentibacter sp. MB35-C1
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedm03032
]
RBQ61_03460 (gyrA)
03400 DNA repair and recombination proteins [BR:
sedm03400
]
RBQ61_03460 (gyrA)
Enzymes [BR:
sedm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RBQ61_03460 (gyrA)
DNA replication proteins [BR:
sedm03032
]
Prokaryotic type
DNA Topoisomerases
RBQ61_03460 (gyrA)
DNA repair and recombination proteins [BR:
sedm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RBQ61_03460 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
WMJ77996
LinkDB
All DBs
Position
720398..722866
Genome browser
AA seq
822 aa
AA seq
DB search
MSENENKSKIIETNITEEMRKSYLDYAMTVIVSRALPDVRDGLKPVHRRILYSANELGLT
PDKPHKKSARIVGDVLGKYHPHGDSAVYDAMVRLAQSFSMRYPLIDGHGNFGSVDGDQAA
AMRYTEARMSKIALELLRDFNKDTVDFRPNFDETLKEPVVLPSRFPNLLVNGSQGIAVGM
ASSIPPQNIGEVINGVMAYIDDPDIDVPGLMRYIKGPDFPTGAIIEGKENIKNAYMTGRG
FVKVKSRVEIEEIKNNKSRIIVSELPYMVNKARLIEKIANLVKDKKIDGISDLRDESDRK
GMRIVIEIKRDYNPNIVLNNLYKHTQLQDNFSIIMIALVNNEPKVLTLKEMVHYYVEHQR
EIVVRRTKYDLNKAEARAHIVEGLRIAIDNIDEVIRIIRSSYDDAEKKLMDAFNLSEIQA
RAIIDMRLRRLQGLEREKLDAEYKELMEMIAKYKEILSNQHLVDNIIKDELKDIKNNFYD
ERRTEIIADEGEITVEDLIEEENVAITLTNFGYIKRLPEDTYKAQNRGGKGITALKTREE
DFVKDLFITSTHDNLLFMTNKGRMFRIKAYEVPEARRQAKGTAAINLISIDSGEQVRSII
PIREFNDDEYLIFVTKKGIIKKTKLSDFDTTRKTGLVAIKIADDDELINVSKTDGTKDIF
IVTKSGKGIKFNEKDVRATGRNSMGVKAITISDEDELVTMSIINENNESTEKKYILTVTE
NGYAKITLSQEYRCQNRGGKGMKAHNVNNKTGPIIGSLIVEKEDDIMMLSINGSIIRMHA
TEISIMGRDTQGVIAMRLNGDDRVVSVAKIYSEDRSLEDEEE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaatgaaaataaaagtaagattatagaaacaaatattaccgaggaaatgaga
aaatcttatttagattatgctatgacggttattgtttcaagagccctgccagatgtaaga
gatgggcttaaacctgttcatagaagaattctttattccgcaaatgaacttggattgaca
cctgataaacctcataaaaaaagtgcacgtattgtcggtgacgttctcggtaagtatcat
cctcacggagattcagctgtatatgatgcaatggtacgtttggctcagagcttttctatg
cgttatccattgatagatggtcatgggaattttggttctgttgatggagaccaagctgcg
gcaatgcgttatacagaagctagaatgtcaaaaattgcattggagcttttaagggatttt
aataaagatactgttgatttcaggcctaactttgatgaaacattgaaagagcctgttgtt
cttccaagccgttttccgaatcttcttgttaacggctcacagggtatagctgttggtatg
gcaagctctatccctcctcagaacataggagaggtaataaatggggttatggcatacatt
gatgatccggacatagatgttcctgggcttatgagatatataaaaggccctgattttcct
acaggtgcaattatagagggaaaagaaaatatcaaaaatgcctatatgacaggaagagga
ttcgtaaaggttaaatcaagagttgaaatagaggaaataaaaaataataaaagcagaata
attgtatccgagcttccttacatggtaaacaaagcaaggttgattgaaaaaatagcaaat
cttgtaaaagataagaaaatcgacggcatttccgatttaagggatgaaagtgatagaaaa
ggtatgaggattgttattgaaattaagagagactacaatcctaacatagtacttaacaat
ttatataagcatactcagcttcaagataatttcagcattattatgatagctcttgtaaat
aatgagcctaaggtgttgacacttaaggaaatggttcattattacgttgagcatcaaaga
gaaattgtagtaagaagaacaaagtatgatttgaataaagctgaagcaagagctcatatt
gttgaaggtttgagaatagccattgataatattgatgaagttataagaataataagatct
tcttatgacgatgcagagaaaaaattgatggatgcatttaatttatcagaaattcaggca
agagcaatcattgatatgaggcttagacgtctgcaaggcctggaaagagaaaaattagat
gcagagtacaaagaattaatggaaatgattgctaaatataaagaaattctttcaaaccag
cacctggtggacaacataataaaagatgaattaaaagatattaaaaataatttttatgat
gaaagaagaacagaaataattgcagacgaaggcgaaataactgtagaagatttaattgaa
gaagaaaatgttgcaattactcttactaattttggatacatcaaaagacttcctgaagac
acgtacaaggctcagaatagagggggcaagggaataacagcactcaaaacaagagaagaa
gattttgtaaaggatttatttataacatctactcatgataatcttctgtttatgacaaac
aaaggaagaatgttcagaattaaggcatatgaagttcctgaagcaagacgtcaggccaag
ggtacagccgctataaatttgataagcatagattcaggtgagcaagtaagatcaataatt
ccaataagagagttcaatgacgatgaatacctaatatttgtaaccaaaaaagggattatt
aaaaagactaaactcagcgattttgatacaacaagaaaaacaggtttagtagcaataaaa
atcgccgatgatgatgagcttataaatgtttcaaaaactgatggcactaaggatatattt
atagttacaaaatccggtaagggaataaaattcaatgaaaaagatgtaagagcaacaggc
agaaactctatgggtgttaaggcaataaccataagtgatgaagatgagcttgttacaatg
agcataattaatgaaaacaatgaaagcactgaaaagaaatatattttaacagtaacggaa
aacgggtatgcaaaaataaccttgtctcaggaatacagatgccagaacagaggcggaaag
ggaatgaaggcacataatgtaaataataaaacaggcccgataataggttctttgattgtt
gaaaaggaagatgacataatgatgctgagcatcaacgggtcaattataagaatgcatgca
acggaaatttcaattatgggaagagatactcaaggagtaattgccatgagattaaatggc
gacgatagagtagtatctgtagcaaaaatttattcagaggaccgtagtttggaagacgaa
gaagaataa
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