Sedimentibacter sp. MB35-C1: RBQ61_03940
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Entry
RBQ61_03940 CDS
T10438
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
sedm Sedimentibacter sp. MB35-C1
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_50
PAS
HTH_22
AAA
AAA_16
PAS_9
AAA_7
HTH_7
HTH_30
Mga
HTH_28
HTH_psq
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WMJ78091
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Position
complement(828648..830420)
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AA seq
590 aa
AA seq
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MSELQKIKEIAIEIVKATSKILNDAEVIIVDQNGSFMAFNDSYLKRKKNAEWKPYIDTII
KRKEIAIIENPGENPLCKGCSNEGNCPQTLEIIVPFDIKEKYIGYISIVTFSQEAKKMYL
KNKKQVVEFLQTMINVMVSAGKEHFSKLEAEKTYKQLDAIIQHMDYIVFTCNTNGIIQCA
NQAFYNFFNLDSNNNANINITELVESRAISLAILEKKGFEDQESAIVFNNIMHRMILSCK
AMKSEDGTCAGFAFFVRTIEDARRFMSNVPALTPDDSLNQIVGKSPEIMELKNKISHFSQ
STSTVLIRGETGTGKELVARSLHSLSSRRDKPFVTINCAAIPDSLLESELFGYEEGTFTG
ASKGGKAGLFEIGNNGTIFLDEVGDMPLHLQAKLLRVLQDNQVIRLGGFHPIDLDIRIIA
ATNQNLEKMVQDKKFRSDLFYRLNILPLNVPPLRNRISDFNDLVFHFIKKYNTRLKKNIS
GVDNDFLNMLKSYTWPGNIRELENAIEYAINLEDGPRLTKSVYPPDILTYTNNHDNSSLK
NMIKQYESSIIQETLQKFNNEKNSINKAAKALDISRASLYQKIKEYNIEI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattacaaaaaattaaagagatagccatcgaaatagttaaagcaacaagcaaa
attttaaatgatgccgaagtcattatcgttgaccaaaacggttcttttatggcatttaat
gatagttatctgaaacgtaaaaaaaacgctgagtggaagccatacattgatactataata
aagcgaaaagaaatagccattatagagaatccaggagaaaaccctctgtgcaaaggatgc
tccaatgaaggtaactgccctcaaactctggagattattgttccctttgacattaaggag
aaatatatcggctatattagtattgtaacattttcgcaggaagctaagaaaatgtactta
aaaaacaaaaagcaggttgttgaatttcttcaaacaatgattaatgtaatggtaagcgcc
ggcaaagaacatttttcaaagcttgaagcagaaaaaacatacaaacagcttgatgctata
atccagcacatggactacatagtttttacatgcaataccaacggcataatacaatgcgca
aaccaggccttttacaattttttcaatctcgattccaataataatgctaatattaatata
accgagcttgtagaatcccgagcaatatctttagctattcttgaaaaaaaaggttttgaa
gaccaggaaagcgcaatagtttttaataacataatgcaccgtatgatattaagctgcaaa
gcaatgaaaagcgaagacggcacatgtgcagggtttgcattttttgtaagaacaattgaa
gatgctcgaaggtttatgtctaacgtacctgccctgactcctgacgattcattaaatcaa
attgtgggaaaaagccctgaaataatggaattgaagaataaaataagtcatttttcacaa
agcacttctactgttttaataagaggcgaaacgggaaccggcaaagaattggttgcaaga
agccttcacagcctaagctcgcgccgcgataagccatttgttacgatcaactgtgcagcc
atacctgacagccttttggaaagtgagcttttcggttatgaagaaggaacttttaccggt
gcaagcaagggtggaaaggcaggcctttttgaaataggaaataacggaacaatttttctc
gacgaagtcggagatatgcctcttcatctgcaagcaaagcttttacgtgttcttcaggat
aatcaggtcatacgactcggcggtttccatcccatagatttagacatacgcattatagct
gccacaaatcagaaccttgaaaaaatggtgcaggataaaaaattccgatcggatctgttt
taccgtttaaacatacttccgttaaatgtacctcccctaagaaaccggatttcagatttt
aatgatcttgtatttcattttattaaaaaatacaatactcgattaaaaaagaatatatcc
ggagttgacaatgactttttaaatatgctgaaaagctacacatggcccggcaatatacga
gagttagaaaacgcaattgaatatgccataaacctggaagacggtccccgacttacaaag
tctgtatatcccccggatatccttacatatacaaataatcatgacaactcttcgctaaaa
aatatgattaagcaatatgaaagctccatcattcaggaaacactgcaaaaattcaacaac
gaaaaaaacagcataaataaagccgcaaaagctttagatatcagcagggcatccctgtat
caaaaaatcaaggaatataatatagaaatttaa
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