Sedimentibacter sp. MB35-C1: RBQ61_04815
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Entry
RBQ61_04815 CDS
T10438
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm03030
DNA replication
sedm03430
Mismatch repair
sedm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBQ61_04815 (dnaX)
03430 Mismatch repair
RBQ61_04815 (dnaX)
03440 Homologous recombination
RBQ61_04815 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sedm03032
]
RBQ61_04815 (dnaX)
03400 DNA repair and recombination proteins [BR:
sedm03400
]
RBQ61_04815 (dnaX)
Enzymes [BR:
sedm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBQ61_04815 (dnaX)
DNA replication proteins [BR:
sedm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBQ61_04815 (dnaX)
DNA repair and recombination proteins [BR:
sedm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBQ61_04815 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DnaX_C
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_30
AAA_14
AAA_24
AAA_5
AAA_2
AAA_18
AAA_19
Cas_Csa4
Motif
Other DBs
NCBI-ProteinID:
WMJ78256
UniProt:
A0AA51DD70
LinkDB
All DBs
Position
1054254..1055939
Genome browser
AA seq
561 aa
AA seq
DB search
MSHQAIYRKFRPKTFDDVLGQEHVTRTLKNQIMTDNIAHAYLFSGIRGTGKTSTAKIFSR
AVNCLNNHDGNPCNECEICKSILNETNMDVIEMDAASNNGVEDIRELRDKVKFLPVKSRY
KVYIIDEVHMLSKGAFNALLKTLEEPPEHLLFILATTEPQKIPATILSRCQRFDLKRIKS
DVIVENMKSICEEIGIEYDEKALSLIAANSEGAMRDAQSILDRCISFNEDKIDYETVINL
LGTVNYQVVLEAANYMVDKDIKSTMVLVDDILNRGKEILSFLDELIVCFRNMMIIKSTGL
TDNIIRMSEEEAGDLKKLSNRVSIDEIVEFIEELSSAQLECKRALNPRVLLEAKLIKMLN
KVEDLNIGSLINRIEELENSIKNGNTATVIKTKPPAGRHVAAETRKKSAPAGNALNPENF
EIKKQDTSEKIVKEEQFENKSDEAIYNAIINNWQAILKKVRSENAGLQAIIRESRLHEVK
NKKAVFEFDPKFTFHINAANQPKNKVKFKEVLSGILNEECEVEFTIKKDEKPIKPKHTIE
DIYEDVVREFGEEIVEFKQED
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgtcacatcaagcaatatacaggaaatttcggcccaaaacatttgatgatgttcttgga
caggagcatgttacaaggacgctaaaaaatcaaataatgacggataatatcgctcatgct
tatcttttcagcggtataaggggaacaggcaagacttccacggcaaaaatattttcaaga
gctgtaaattgccttaataaccatgacggcaatccgtgcaacgaatgtgaaatatgtaaa
agcatcctgaatgaaaccaatatggatgttatagaaatggatgctgcttcaaataacggc
gttgaagatataagagaattacgcgacaaggttaagtttcttcccgtaaagagccgatac
aaggtatacataatagatgaagttcatatgctttcaaaaggagcatttaatgctctgctc
aagacgcttgaagagcctccggagcatttattgttcatacttgcaacgacagaacctcaa
aaaattccggctacaattctgtcgagatgtcaaaggtttgatttaaaaagaattaaatct
gatgtaattgtagagaatatgaaaagcatatgtgaagaaattggtatagaatacgatgaa
aaagcgttaagtcttattgcagcaaactcggaaggtgcaatgagagacgcacagagcata
ctggacaggtgtatatcatttaatgaggataaaatcgattatgaaactgtgataaatctt
cttgggacggtaaattatcaggtcgtgttagaagctgctaattacatggtagataaagat
ataaaaagcaccatggttttggtagacgacatattgaataggggtaaggaaattttatct
ttccttgacgaactgatagtttgcttcagaaatatgatgattataaagtcaaccggttta
actgataacataatcagaatgtcggaagaagaagcaggagatctgaaaaaattaagcaac
agggtttccattgatgaaatcgttgaatttatcgaggagctttcgtctgctcaattagaa
tgtaaacgtgccttaaatcctagggtcttattggaagctaagctgataaaaatgctcaac
aaggttgaagatctaaacatcggttcattgattaatagaatagaagaacttgaaaatagt
attaaaaacggaaatacggcaactgttattaaaacaaaaccgcctgccggcagacacgtt
gcggctgagactaggaaaaaatctgctccagcaggaaatgctttgaacccggagaacttt
gaaattaaaaaacaagatacttcagaaaaaattgttaaagaagaacaatttgaaaataaa
agtgatgaagcaatatacaatgccattataaataattggcaggcaatacttaaaaaggta
agaagtgaaaatgcaggacttcaagcaataatacgagagtctagattgcatgaggttaaa
aataaaaaagctgtatttgaatttgaccccaaatttacttttcatataaatgctgcaaat
caaccaaaaaataaagtgaaattcaaggaagttttgagcggaattttaaatgaagagtgt
gaagtagaatttacgataaaaaaagatgaaaaaccaattaaacccaaacatacaatagaa
gatatatatgaagatgttgtaagagagtttggagaagaaatagtggaatttaagcaggag
gattaa
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