Sedimentibacter sp. MB35-C1: RBQ61_05150
Help
Entry
RBQ61_05150 CDS
T10438
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm00260
Glycine, serine and threonine metabolism
sedm00460
Cyanoamino acid metabolism
sedm00630
Glyoxylate and dicarboxylate metabolism
sedm00670
One carbon pool by folate
sedm00680
Methane metabolism
sedm01100
Metabolic pathways
sedm01110
Biosynthesis of secondary metabolites
sedm01120
Microbial metabolism in diverse environments
sedm01200
Carbon metabolism
sedm01230
Biosynthesis of amino acids
sedm01240
Biosynthesis of cofactors
sedm04981
Folate transport and metabolism
Module
sedm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RBQ61_05150 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RBQ61_05150 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RBQ61_05150 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RBQ61_05150 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RBQ61_05150 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RBQ61_05150 (glyA)
Enzymes [BR:
sedm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RBQ61_05150 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
WMJ78322
UniProt:
A0AA51H8E2
LinkDB
All DBs
Position
1121198..1122454
Genome browser
AA seq
418 aa
AA seq
DB search
MLKYTKISDLEVYGIVEDELKRQEHNIEMIASESTASMEIMELSGSIFTNKTLEGYPGAR
FQAGSHEADRLETLGIERAKALYGAEHANLQVYSGSSANYGVYAAVLKPGDRVLSMRLDQ
GGHLTHGSPANFLSKVYDYDFYGVNKETEQIDYDELEKKAKDFLPKLIIAGGSSYPRLID
YKRIGEIAKSVGAYFMVDMAHISGLVAAKLIPSPVPYADFVSSSTTKTLCGPRSGFILCK
KEHAKALDKGVFPGSIGSMHLTTMAAKTWLFKHAATEEFKNVMKQVLANGKTLAKELADH
GFRIVSGTTDNHIVMVDLRSKEISGKVFQNALDKVGITVNKNQIPFDPASPFVTSGVRIG
VTSITQRGLKENEIKEIADIMDKVASDPENESNLAECKKRTEKLISRFPLYPAGSFDN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaatatacaaaaatatcagaccttgaagtatatggaattgttgaagacgaattg
aaacgccaggagcataatatagagatgattgcttccgaaagtactgcttctatggaaatt
atggaattatccggatcaatattcacaaataaaacacttgaaggatatccaggtgctcgt
tttcaggccggatcgcatgaagcggacagacttgaaactcttggtatagaaagggcaaag
gcattgtatggtgccgagcatgctaaccttcaggtttattcaggatcatcagcaaattat
ggagtatatgcagcagtattgaagcctggagatagagtattaagcatgagacttgatcag
ggaggacaccttactcacggaagtccggcaaattttctctcaaaggtttatgattatgat
ttttatggagtaaacaaggaaacggaacaaatagattacgatgagcttgaaaaaaaggct
aaggattttcttccgaaactgattattgccggaggaagttcatatccgaggcttattgat
tacaaaagaattggtgaaattgcaaaatctgtaggagcttatttcatggttgatatggct
cacataagcggattggtggctgctaaacttatacctagccctgtgccatatgcggatttt
gtttcatcatctactacaaagacactttgcggtccgagaagtggttttatactctgcaag
aaagagcatgcaaaggctttggacaagggagttttcccaggctcgataggttcgatgcat
ttaactacaatggctgcaaaaacatggttgtttaagcatgctgcaacggaagaatttaaa
aatgtaatgaaacaggtacttgcaaatggaaaaacgttagccaaagagcttgcagatcac
ggattcagaattgtgagcggcactacagacaatcacattgttatggtagaccttagatct
aaggaaataagcggcaaggttttccaaaacgcgcttgacaaagtgggtataacagtaaat
aaaaaccagataccttttgacccagcatcaccgtttgttacaagtggtgtaaggataggg
gttacttcaataactcaaagaggattgaaggaaaacgaaataaaggaaatagctgacata
atggataaagttgcatctgatccggaaaacgaatcgaatcttgctgaatgcaaaaaaaga
acagaaaaattaatatcaagatttccgctgtaccctgctggaagctttgataattaa
DBGET
integrated database retrieval system