Sedimentibacter sp. MB35-C1: RBQ61_05575
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Entry
RBQ61_05575 CDS
T10438
Symbol
dapA
Name
(GenBank) 4-hydroxy-tetrahydrodipicolinate synthase
KO
K01714
4-hydroxy-tetrahydrodipicolinate synthase [EC:
4.3.3.7
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm00261
Monobactam biosynthesis
sedm00300
Lysine biosynthesis
sedm01100
Metabolic pathways
sedm01110
Biosynthesis of secondary metabolites
sedm01120
Microbial metabolism in diverse environments
sedm01230
Biosynthesis of amino acids
Module
sedm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBQ61_05575 (dapA)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
RBQ61_05575 (dapA)
Enzymes [BR:
sedm01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.7 4-hydroxy-tetrahydrodipicolinate synthase
RBQ61_05575 (dapA)
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Gene cluster
GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-ProteinID:
WMJ78407
UniProt:
A0AA51DB91
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All DBs
Position
1215886..1216788
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AA seq
300 aa
AA seq
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MIDFVRGCGVALVTPFSNGKIDYNTLEKLIDMHVELSGSIIVAGTTGEASTLTDDEYHEL
IKFVVDRVNKRIPVIAGAGSNCTSSAIKKAKFCEEAGADGLLIVTPYYNKTTQNGLINHY
RLIAENTALPIIVYSVSGRTGMNIEPSTVLELSKIKNIVGIKEASGNISQVAEIIRICPK
DFFVYSGNDDMVIPLMALGGHGVISVVANIMPSETKKMVDDFKDGRLIEARDAQVGMNGL
VNALFIETNPIPIKEAMGLMNMCSSEVREPLYRMSEENKEKLISEMNRCGIIITSGAGRR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttgtaagaggctgcggagtggcattggtaacgccgttttcaaatgggaaa
attgactataataccctggaaaaacttattgacatgcatgttgaactgtcaggatcaatt
attgtggcaggaacaacaggagaagcatcaacacttaccgatgatgaatatcatgaatta
attaaatttgttgttgacagagttaacaagagaatacctgttattgcgggtgcaggaagc
aactgcacatcttcagcaattaaaaaagctaaattttgcgaagaggcgggtgctgacgga
ttattgatagtaactccgtattacaacaaaactactcaaaacggtttgataaatcactac
agattaattgcagaaaatacagcgcttcccataattgtttacagtgtttcaggaagaacg
ggaatgaatatagagccaagtacagtattagaactttcaaagattaaaaatattgttgga
attaaggaagccagcggaaatataagccaggttgcggaaattataaggatttgtcctaag
gatttctttgtttattcaggaaacgatgatatggttattcctttgatggccttgggaggt
catggtgttatctcagtagttgccaatataatgccgtctgaaactaaaaaaatggttgat
gactttaaagatggaaggcttatcgaggcgagagatgctcaggttggtatgaatgggctt
gttaatgccttatttattgaaacaaatcctattcctattaaagaagcaatgggtttgatg
aatatgtgcagttctgaggtgagagagcctctttacagaatgtcggaagaaaacaaagaa
aaactgattagtgaaatgaaccgctgcggtattattataacaagcggcgcaggtagaagg
taa
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