Sedimentibacter sp. MB35-C1: RBQ61_07540
Help
Entry
RBQ61_07540 CDS
T10438
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.8.1
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm00010
Glycolysis / Gluconeogenesis
sedm00020
Citrate cycle (TCA cycle)
sedm00620
Pyruvate metabolism
sedm00650
Butanoate metabolism
sedm00720
Other carbon fixation pathways
sedm01100
Metabolic pathways
sedm01110
Biosynthesis of secondary metabolites
sedm01120
Microbial metabolism in diverse environments
sedm01200
Carbon metabolism
sedm01210
2-Oxocarboxylic acid metabolism
Module
sedm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RBQ61_07540 (nifJ)
00020 Citrate cycle (TCA cycle)
RBQ61_07540 (nifJ)
00620 Pyruvate metabolism
RBQ61_07540 (nifJ)
00650 Butanoate metabolism
RBQ61_07540 (nifJ)
09102 Energy metabolism
00720 Other carbon fixation pathways
RBQ61_07540 (nifJ)
Enzymes [BR:
sedm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase (ferredoxin)
RBQ61_07540 (nifJ)
1.2.8 With a flavin or flavoprotein as acceptor
1.2.8.1 pyruvate synthase (flavodoxin)
RBQ61_07540 (nifJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_6
Fer4_7
Fer4_2
Fer4
Fer4_10
Fer4_9
Fer4_16
Fer4_21
Fer4_8
Fer4_17
Pyruv_OxRed_insertion
Fer4_4
Transketolase_C
LdpA_Fe-S-bd
Fer4_18
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
WMJ78770
LinkDB
All DBs
Position
1592728..1596261
Genome browser
AA seq
1177 aa
AA seq
DB search
MTKRRTQTMDGNTAAAYSSYAFTDVAAIYPITPSSPMAGHVDEWASQGKKNIFGETVLVK
EMQSEGGAAGTLHGSLQSGALTSTYTASQGLLLKIPNMYKIAGELLPAVFHVSARSLASN
SLSIFGDHQDVMATRQTGFTLLASSGVQQALDLAAVAHLSAIKSRLPVLHFFDGFRTSHE
MQKIEVLEYDELAKLVDYEAIKEFRNHALSPNHPVLRGTTQNPDVFFQLRESINKFHDAV
PGVVQSYMDEINKLTGRNYKLFNYYGAEDAENIIIAMGSGCETISEVIDYLNAKGEKVGL
VEVHLYRPFDAEFMLRQIPKTVKKIAVLDRTKEPGSNGEPLYLDVKNAFYNAENAPIIVG
GRYGLGSKDFKPDDAIAVFENLKLDNPKNDFTVSIVDDVTFKSLPVSNESIDPTPKGTIA
CKFWGYGSDGTVSANKSAIKIIGDNTDFYAQAYFEYDAKKSGGLTISHLRFGKSPIKEPY
NINRADFIACHNQAYVSKYNLTSGIKKGGTFLLNCIWSEEELEKYLPAALKRSIAANEVK
FYIIDAVDIAKEVGLGGKINMVMQSAFFRLADIIPTEDFVKYLKNEVEKSYGSKGQNIVD
MNNLAIDKGIESIKRVNVPESWKTAEDEAVKKNSEVPEFVEDVIFVMNRQEGDNLPVSSF
NEREDGSFPLGVTAWEKREIAIDVPLWNPDKCIQCNQCSYVCPHAVIRPTLISEEEMKNA
PEGFKAVNAVGFKNMKYHLAISAQDCTGCGSCVNICPAKEHAIEMKPLAENREKYINDWN
FANEIVQKEIPEKVERTVKGSQFKKPLLEFSGACAGCGETPYAKLVTQLFGDRMMISNAA
GCSTVWGGSPQVSYTTNEKGHGPSWGFSLFEDNAEYGFGMYLGVQKIRGSAKLKADAAVE
SAEGKLKDALNEWIDGFDKSEGTRDRADKLTAALEEEKGSDKLLNELYDIRDYFVKRSHW
IFGGDGWAYDIGYGGVDHVLASGENVNLLVFDTEVYSNTGGQSSKATPTAAIAEFASSGK
RTRKKDLGMMAMSYGYVYVAQIAMGADKNQTLKAIIEAENYPGPSLVIAYSPCINHGIKA
GMGKSQIHEKEAVDAGYWTLYRYNPLLENDGENPFVLDSKEPTADFKEFLMSEVRYASLY
KLFPDKADELFEKAKEDAEYRYERYLKMAHMPGKVNA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacgcagaactcaaacaatggacggcaatacggcggcagcatattcatcatat
gcttttaccgatgttgccgcaatatatcccataacaccatcatcaccaatggcaggccat
gttgatgaatgggcttcacaggggaaaaagaatattttcggtgaaaccgtcctggtaaag
gaaatgcagtcagaaggcggtgcggcaggaacgctgcacggatcgctacagtcaggggcg
ctgacatcaacctatactgcttcacagggcttactattaaaaataccaaacatgtataaa
attgcgggtgaattgcttccagccgtatttcatgtcagcgcccgttcactggcatcaaat
tcattaagtatatttggtgaccatcaggacgttatggctacgagacagacaggttttacg
cttttggcatcgagtggcgttcagcaggctcttgatttagctgctgttgcccatttaagt
gctataaaatcgcgacttccagttcttcactttttcgatggcttcagaacgtctcatgaa
atgcagaaaattgaggttcttgaatatgatgaattggctaagctggttgattatgaagcc
atcaaagaattcagaaatcatgctctgagcccgaatcatccggtgcttagaggaacaaca
cagaatcctgatgtattctttcagttgagagaatcaataaataaattccatgatgcagta
ccgggagttgtacagtcatacatggatgaaatcaataaacttacaggaagaaattacaaa
cttttcaactattacggtgcagaggatgcagaaaacataattatcgctatgggatcagga
tgtgaaaccataagtgaggtcattgattatctcaatgcaaagggagaaaaggtaggtttg
gttgaggttcatctttacagaccgttcgatgctgaatttatgcttcgtcaaattccgaag
acagtgaaaaaaatagctgtgcttgatagaacaaaagaaccgggatcaaacggagaacct
ctgtatcttgacgttaaaaatgcattttacaatgcagaaaacgctccaataattgtagga
ggaagatatggtctgggctcgaaagatttcaaaccggacgatgcaattgcagtatttgaa
aatttaaagcttgataatccaaaaaatgattttaccgtaagcattgttgatgacgttaca
tttaaatcactgcctgtaagcaatgaaagtatagatccgacacctaagggaacaattgca
tgtaaattctggggatacggctctgacggaacagtaagtgctaataaatcagcaattaaa
attatcggagacaatactgatttctatgctcaggcgtactttgaatatgatgctaaaaag
tcaggcggacttactatttcgcatctaagattcggaaaatctcctattaaggaaccatat
aacattaacagagcggactttattgcatgccataatcaggcatatgttagtaagtacaat
ctgacctcaggaataaaaaagggtggaacattcctgctgaactgtatctggagcgaggaa
gagcttgaaaaatacctgcctgcagctctaaaaagaagtatagcggctaacgaagttaag
ttttatatcatagatgctgttgatatagcaaaagaagttggacttggcggaaagatcaac
atggtaatgcaatctgcatttttcagacttgcggacataattcctacagaggattttgtt
aaatatctgaagaacgaagttgaaaaatcttacggaagcaaaggacagaacattgttgat
atgaataaccttgcaattgacaagggtattgaaagcataaaaagagttaacgttccggag
tcatggaaaacagctgaagatgaagctgtaaagaaaaattcagaagttcctgaattcgta
gaagacgtaatatttgttatgaacagacaggagggagacaatcttccggtaagttcattt
aatgagagagaagacggttcattcccactgggagttactgcttgggaaaagagagaaata
gctatagatgttccattgtggaatccggataaatgtattcaatgtaaccaatgttcttac
gtttgtccacatgctgttataagaccgacacttatttctgaagaagaaatgaaaaatgct
cctgaaggatttaaagctgtgaatgcagttggatttaaaaatatgaagtatcatctggct
atatctgcgcaggattgtacaggatgcggaagctgtgtaaacatatgtcctgctaaagag
catgcaatagaaatgaaacctctggcagaaaacagagagaaatatattaatgactggaac
tttgctaatgaaatagttcagaaagaaattccggaaaaagttgaacgtactgttaaggga
agccagtttaaaaaacctctgcttgaattttcaggtgcttgtgcaggatgcggtgaaaca
ccttacgcaaaactggttacacagctgttcggcgacagaatgatgatttcaaatgcagca
ggctgttcaacagtttggggaggttcaccacaggtatcatatacaacaaatgaaaaagga
cacggaccttcatggggattctcactgtttgaagacaatgctgagtatggcttcggtatg
taccttggtgttcagaaaataagaggttcagctaagttaaaagcagatgcagctgtagaa
agcgcagaaggaaagttaaaagatgctttaaatgaatggatcgacggatttgataaatca
gaaggaacaagagatagagctgacaaacttacagcagcgctggaagaagaaaaaggaagc
gataagcttttaaatgaattatatgatataagagattactttgtaaaaagatcacactgg
atattcggtggagacggatgggcttatgacataggttacggtggagtggaccatgttctt
gcatctggcgaaaatgtaaacttgcttgtatttgatactgaagtatattcaaatactgga
ggacagtcatcaaaggcaactcctacagcagcaattgcagaatttgcttcaagcggaaag
agaacaaggaagaaagaccttggaatgatggcaatgagctatggatatgtatatgttgct
caaatagctatgggtgcagataaaaaccaaactcttaaagcaataattgaggctgaaaac
tatccgggaccgtcacttgtaatcgcttattcaccatgtataaatcatggaatcaaggca
ggcatgggcaaatctcagatacatgaaaaagaagctgtagatgcaggatattggacactg
tacagatacaatccgctgcttgaaaatgatggagaaaatccgtttgttcttgattcaaaa
gagccaacagctgactttaaagaatttttaatgagcgaagtaagatatgcatcactgtac
aaacttttccctgacaaagcagatgaattgtttgaaaaagcaaaggaagatgcagagtat
agatatgagagatatcttaaaatggcgcatatgcccggcaaggtaaacgcatag
DBGET
integrated database retrieval system
