KEGG   Sedimentibacter sp. MB35-C1: RBQ61_07810
Entry
RBQ61_07810       CDS       T10438                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sedm  Sedimentibacter sp. MB35-C1
Pathway
sedm00010  Glycolysis / Gluconeogenesis
sedm00020  Citrate cycle (TCA cycle)
sedm00260  Glycine, serine and threonine metabolism
sedm00280  Valine, leucine and isoleucine degradation
sedm00310  Lysine degradation
sedm00380  Tryptophan metabolism
sedm00620  Pyruvate metabolism
sedm00630  Glyoxylate and dicarboxylate metabolism
sedm00640  Propanoate metabolism
sedm00670  One carbon pool by folate
sedm00785  Lipoic acid metabolism
sedm01100  Metabolic pathways
sedm01110  Biosynthesis of secondary metabolites
sedm01120  Microbial metabolism in diverse environments
sedm01200  Carbon metabolism
sedm01210  2-Oxocarboxylic acid metabolism
sedm01240  Biosynthesis of cofactors
Module
sedm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sedm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sedm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RBQ61_07810 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RBQ61_07810 (lpdA)
   00620 Pyruvate metabolism
    RBQ61_07810 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RBQ61_07810 (lpdA)
   00640 Propanoate metabolism
    RBQ61_07810 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RBQ61_07810 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RBQ61_07810 (lpdA)
   00310 Lysine degradation
    RBQ61_07810 (lpdA)
   00380 Tryptophan metabolism
    RBQ61_07810 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RBQ61_07810 (lpdA)
   00670 One carbon pool by folate
    RBQ61_07810 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sedm04147]
    RBQ61_07810 (lpdA)
Enzymes [BR:sedm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RBQ61_07810 (lpdA)
Exosome [BR:sedm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RBQ61_07810 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 AlaDh_PNT_C GIDA NAD_binding_8 FAD_oxidored FAD_binding_2 HI0933_like Trp_halogenase DAO 3HCDH_N 2-Hacid_dh_C UDPG_MGDP_dh_N NAD_Gly3P_dh_N FAD_binding_3 TrkA_N
Other DBs
NCBI-ProteinID: WMJ78822
UniProt: A0AA51DBX9
LinkDB
Position
1655281..1656669
AA seq 462 aa
MKIAILGGGPAGYVAAVRAAQLGAEVVLIEKKKVGGTCLNRGCIPTKVLLHTAVEIEKAN
NDFKEMGIEIAGAKVNWKQLQKRKDKIISRLVGGVEGLLKSNKIIKIAGEGRFKSTREII
VKNGSEETIVDFDYAVIATGSKPARIPLPGINLPGVITSDEVLSLNAVPKSMAIIGGGVI
GTEIAGVYSALGCKVSIIEMLPDIVEAMDKDIVKPLKEKLISSGVDIFLNTRVASITESQ
DGLVLNAESANGSISITAEKVLLSIGRIPVTDNLSLDSVGIKTDRGRISVNKNMQTSIEN
IYAVGDCIGGVMLAHVASAEGIMAVEAIMNKKPQIDFKTTPYCVYTRPELAGVGLTEEQA
IKKGYDVRVGAVPMYINGKSMIEGETEGIAKYISDADTGEILGLHIAGPRATDLIVEGAL
AIRLEATVDEITSTIHAHPTVGEILHEAAHAVHGNAIHIPKR
NT seq 1389 nt   +upstreamnt  +downstreamnt
gtgaagatagcgatattaggagggggtccggcaggttatgtagctgctgtaagagctgcc
cagcttggggcagaggtagtgcttatagaaaagaaaaaggtaggaggaacctgtttaaac
agagggtgcattcctactaaggttttgcttcatacggcagttgaaatagaaaaagctaac
aatgattttaaggaaatgggaattgaaattgcgggagccaaagtgaactggaaacagttg
caaaaaagaaaagataaaataataagcaggttagtaggtggagtagaaggcctattaaag
agcaataaaattataaaaatagctggtgaaggaaggtttaagagcacaagagaaattatt
gtgaaaaatggatcggaggaaacaattgtcgattttgattatgcagtgattgcaacaggc
tcaaagcctgcgcgtattccgttgccgggaataaatttgccaggagtaataacaagtgat
gaggtgctttccttaaatgctgttccaaaaagcatggctataataggcggaggagttatc
ggcacagaaatagccggtgtttattcagcgttgggctgcaaggtatcaataattgagatg
cttcctgacatagtagaagcgatggataaggatattgtaaaacctctaaaggaaaaactt
ataagcagcggggtggatattttcctaaatacaagggtagcatctattacagaatcacag
gatggccttgtgctgaatgcagaatcggctaatggcagcatatctattactgctgaaaaa
gtgcttttatcaataggaagaataccggttacagataatctttctttagacagtgtagga
attaaaacagacagaggaagaatatcggtaaataaaaacatgcagacaagcatagaaaat
atatatgccgtaggagattgtataggaggagtaatgcttgctcatgtggcatcagctgaa
ggaataatggctgttgaagctataatgaacaaaaaacctcaaattgattttaaaacaact
ccttattgtgtctatacaagaccagaactggccggagtcggactgaccgaagaacaggcg
attaaaaagggatatgatgtaagagtaggtgctgttcccatgtatataaatggcaaatcg
atgatagagggagaaacagaaggaattgcaaaatatatttccgatgcagatacaggtgaa
attttaggacttcatattgcaggaccgagagcaactgatttaattgttgaaggagcactt
gctataaggcttgaagctacagtggatgaaattacttcgacaatacatgctcatccaact
gtgggagaaattcttcacgaagcagctcatgcagtacatggaaatgctatccacattccg
aagagataa

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