Sedimentibacter sp. MB35-C1: RBQ61_08445
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Entry
RBQ61_08445 CDS
T10438
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sedm Sedimentibacter sp. MB35-C1
Brite
Enzymes [BR:
sedm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBQ61_08445 (addA)
DNA repair and recombination proteins [BR:
sedm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RBQ61_08445 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WMJ78947
UniProt:
A0AA51DCA5
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Position
1780018..1783656
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AA seq
1212 aa
AA seq
DB search
MKFSDGQLKVINTRNKNILVSAAAGSGKTTVLVERIIKLLIDDNEDIDKFLIVTFTNAAA
SGMKQKIHKSLIKAVQNSSNKGHLSRQLNLLSRSNISTIHAFCIDIVRKNFHVIGIDPNF
RIGDVNEIDILLNETIDEILEKHYTEKTPGFIQLVESFTGNRGDFELNEIIKDIYRFILS
FPDPMKWLDEKINLLLMSSDGLKKSPWLEAIKDNLRLQLSGGEEILKTAIKLCADDGGPT
PYKETLTDDMQNIQNLEEFLENDFEKFLYSIHSVKYLSLKQIRGKAKEEIDAEKQEEVKL
LRDEYKKIISSINKMIPNRTLSEFAADVNYMHVSMRALFDIICDLDKSFKTKKMDKSIAD
FNDVEHYALEILRQEDIGKSYRSRFKYIFIDEYQDSNSLQEELLSKIKRENNLFMVGDVK
QSIYRFRLSDPAIFNEKCETYPLSERSGQDIRIDLTQNFRSRKEILSGINYVFSNVMNKT
LGEVDYNRDVFLNPGSEFTDNRSDERDCFMDLTIIDKDTSESDDLDDEIRSMKTAELEAY
MAVQKINQLLKKNMNEPIRANNVYNKAGVEAKKIQYKDIVLLMRSVSGWAGIFEQIFNDN
GIPFYFDGGSGYYETIEIQVILNLLKIIDNIRQDVPALSVMRSPIGLFEADDLVQIRLKN
PKLNFIDALYEYKNNCSDDLAIKIRNFIDKIENWKKRSRYSQLSDFIWEVLMETNYYYFV
GMLPNGRIRQANLRMLTEKASDFEKTSMSGLFNFLRYVEKLNNSSSDTGSAKTLGENDNV
VRLMSVHKSKGLEFPVVIICGLNKKFNRTDSSKSILKHKLHGIAPKYINPQQRIYRETLP
RIAVKNIIRTENISEEMRVLYVAMTRAIDRLIMIGTVDKFDRRLKKWSKGPSLYNIYNGD
SFLEWICTTLFKNLDAYSTLSSVSSENMIFETFVSEGVSPAKWNVNKITLSQINRNECEA
AEKKAVRINEMNLFKCHDYSNEKTEINRRLSCEYSFRSSINVPTKLSVTDLKVLKRENIE
TVKFNIPALRDIPQFKEKDSDFTQAEIGSIVHFVMQHLNIYDNMGIENIKEQIDGMVQKK
LLTEQEASVVDVKKIFGFFRTDIGRRMRSSLQVKREVPFVIKKSASEIIEYLDGDDMILI
QGIIDCYFYEDDKIVIIDYKTDEIIDGNTDAAIDEYSRQILSYKEAVEKITGVEVKECYL
YLFDIEQAVEIR
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgacggtcaactaaaagtaataaatacgaggaacaaaaatatacttgtg
tctgcagcggcagggtctggaaagactacagtcctggtagaaagaattattaagttgttg
attgacgataatgaggacatagataaatttttgattgtaacctttacaaatgctgctgct
tccggcatgaagcagaaaattcacaaatctcttataaaggcagtgcagaatagcagtaac
aaagggcatctaagcaggcagcttaatcttttaagcaggtcaaacatttctacaatacac
gcattctgcattgatattgttcgaaaaaactttcatgtaatcggaatcgatccgaatttt
aggataggcgatgtaaatgaaattgatatacttcttaatgaaacaatagacgagattttg
gaaaagcattatacagagaaaacacctggatttattcagcttgttgagagttttaccgga
aaccgcggcgattttgaacttaacgaaattattaaggatatttacagatttattttaagc
tttccagatccaatgaagtggctcgatgaaaaaattaatctgcttttgatgtctagtgat
ggtttgaaaaaatcaccgtggttggaggcaataaaggataatcttaggcttcagctatca
ggaggcgaagaaatacttaaaaccgcgataaaattgtgtgctgatgatggaggtcccact
ccgtataaagaaacactgacggatgatatgcaaaatattcaaaatttggaagagttcctt
gaaaatgattttgaaaagtttctatattcgatacacagcgtgaagtatttgtcactgaag
cagataaggggaaaagcaaaggaagagattgatgcggaaaaacaggaagaagtaaaactt
ctgagagatgaatacaagaaaattataagcagcattaacaagatgataccgaacagaaca
ttgtctgaatttgctgctgatgttaattatatgcatgtttctatgagggctctgtttgac
attatttgcgatctggacaaaagtttcaaaaccaaaaaaatggataaatcgattgcggat
ttcaatgatgtagaacattacgcccttgaaattttgaggcaggaggacataggcaaaagt
tacaggagcaggtttaaatatatatttattgatgagtaccaggatagcaacagcctccag
gaggaattgctgagcaaaataaaaagagaaaataatttatttatggtaggagatgtaaag
cagagcatataccgtttcagattgtctgatcctgcgatttttaacgagaagtgcgaaaca
tacccactttctgagaggagcggtcaggatataagaattgatctgacgcaaaacttcaga
agcagaaaggaaatattgagcgggataaattatgtattcagtaatgttatgaataagact
cttggagaggtggattataaccgggatgtatttttaaaccccggttcggaattcacagat
aaccgttcggatgaaagagactgctttatggatcttacaattatagataaggatacctcg
gaatcagatgacttggatgatgaaatcagatctatgaagacagcagaacttgaagcttat
atggctgttcaaaaaataaatcagcttcttaaaaaaaacatgaatgaacctataagagca
aataatgtatataacaaagcaggtgtagaagcaaaaaaaattcaatacaaggacatagtg
ctgcttatgcgttctgtatcagggtgggcaggtatatttgaacaaattttcaatgataat
gggatacctttctattttgacggaggatccggttattatgaaactattgaaatacaagtt
atattgaatttgcttaaaataattgataacataaggcaggatgttccggctttaagtgtt
atgagatctccaataggcttgtttgaagctgatgaccttgtacaaatacgtcttaagaat
ccaaaattaaattttattgatgctctgtacgaatataaaaataactgctctgatgatctt
gccataaaaataagaaattttatagacaaaattgaaaactggaaaaagaggagcaggtac
agtcagctaagtgattttatatgggaggtattgatggagacaaattattattattttgtc
ggaatgcttcccaatgggagaataaggcaggcaaatctaaggatgctgactgaaaaagca
tctgattttgaaaaaacttccatgagtggtctgtttaattttttaaggtatgttgaaaag
cttaataattcttcatctgataccggtagtgcaaaaacacttggagaaaatgacaatgtt
gtacggcttatgtctgtgcacaaaagcaagggccttgaattccctgttgtaattatttgc
ggcctgaacaaaaagtttaatcggaccgattcgtcaaaaagcatattaaagcataaactg
catggaatcgctccaaaatatattaatccgcagcagaggatatacagagagactttgccg
agaatcgccgtaaaaaatataataagaactgaaaatatttcagaagaaatgagggttctt
tatgttgccatgacgagagcaattgacaggctaataatgataggaacagttgataaattc
gacagaaggttgaaaaaatggtcaaaaggaccgtctttgtataatatttacaatggcgat
tcatttttggaatggatttgcaccactttatttaaaaacttagatgcatacagcacgctt
agtagtgtaagctctgaaaatatgattttcgaaacatttgtcagcgaaggtgtcagtcct
gcaaaatggaatgtaaacaagattacattatctcaaataaacagaaatgagtgtgaagcg
gctgaaaaaaaagctgtgaggataaatgaaatgaatttgtttaaatgccatgattacagc
aatgagaaaacagaaataaaccgcaggctgagctgtgaatactctttcagaagttccata
aatgttcctacaaagctttcggtaacagatttaaaggttttaaagcgcgagaatattgaa
acggttaagtttaatattcctgctttgagagacatacctcagtttaaagaaaaggattct
gattttacacaggcagaaatagggtcaattgtccacttcgtaatgcagcatctcaatatt
tatgacaacatgggaatagaaaatattaaggaacaaatagatggtatggttcaaaaaaaa
cttttgactgagcaggaagcaagtgtggttgatgtaaaaaaaatatttgggtttttcaga
actgatataggcagaagaatgagatcgtcgttacaagtaaagagagaagttccatttgtg
atcaaaaaaagtgcttctgagattattgaatacctggatggtgatgatatgatactaatt
cagggaattatagactgctatttctatgaagacgataaaattgtaataatagactataaa
acggatgaaattattgacggcaatacagatgctgctattgatgaatacagccgtcagata
ttgtcatataaggaagctgtagaaaaaataacgggagtcgaagttaaggaatgttacctg
tacttgtttgatattgaacaggcggttgagataagataa
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