Sedimentibacter sp. MB35-C1: RBQ61_09315
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Entry
RBQ61_09315 CDS
T10438
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RBQ61_09315 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sedm01007
]
RBQ61_09315 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sedm03016
]
RBQ61_09315 (aspS)
03029 Mitochondrial biogenesis [BR:
sedm03029
]
RBQ61_09315 (aspS)
Enzymes [BR:
sedm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RBQ61_09315 (aspS)
Amino acid related enzymes [BR:
sedm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RBQ61_09315 (aspS)
Transfer RNA biogenesis [BR:
sedm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RBQ61_09315 (aspS)
Prokaryotic type
Other AARSs
RBQ61_09315 (aspS)
Mitochondrial biogenesis [BR:
sedm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RBQ61_09315 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
WMJ75830
UniProt:
A0AA51D688
LinkDB
All DBs
Position
1963590..1965368
Genome browser
AA seq
592 aa
AA seq
DB search
MDTMGQLKRTDMCGELCLGDIGREVVLMGWVQKRRSLGGLIFADLRDITGLVQVVFDTEV
NNEAFDKAGSLRSEFVIAVKGKVFERKSKNPEMKTGDIEVYAEELKILDTAETPPIYIKD
NDDVSEQMRLKYRFLDLRKPHMQNNLIIRSKTSKVIREFLYENDFNEIETPFLTKPTPEG
ARDYLVPSRVNPGKFYALPQSPQLFKQLLMVSGMNRYFQIVRCFRDEDLRANRQPEFTQV
DIEMSFVDVEDVISVNEKLIQRIFKEVKNIDIEVPIKRMPYKVAMDKYGCDKPDLRFGYE
LTNITKIFRNTEFNAFKSTCESKGLIKCIKIEGDADEFSKKGISKLEKFVKTYGAKGLAW
MKYEGGAIDSPIAKFLSEEEIKQLESSLELKEKDIVFIVADKESVVNTALGALRIEIAKK
KGLIDNNKYELVWITDFPLFEFDEEENRYVAKHHPFTSPVDEDIEKIESDPGEVRAKAYD
IVINGDEIGGGSIRITNRELQNRMFRALGFTDEEANEKFGFLLEAFKYGVPPHGGIAYGL
DRFMMLLTESDNIRDVIAFPKTQSATCLMTEAPTYASENQLNELSIEVKDKE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatacgatgggtcaattaaaaagaaccgatatgtgcggagaattatgccttggtgat
ataggacgagaagtggtgcttatgggctgggttcaaaaaagaagaagccttggaggactt
atttttgccgatcttagagatataacagggttagttcaggttgtattcgatactgaagtg
aataatgaagcatttgataaagcaggaagtttgagaagtgaatttgttattgctgtaaaa
gggaaggtttttgaaagaaaatccaaaaatccggaaatgaaaaccggcgatatagaagtt
tatgctgaagaattaaagatacttgatactgcggaaactccgcctatttatattaaggat
aatgacgatgtgtcagagcagatgcgtctaaaatacagattccttgatttaaggaaacct
cacatgcagaataatcttataataagaagtaaaacatctaaagttataagagaatttttg
tacgaaaatgattttaatgaaatagagacaccgtttttaacaaaaccgactcctgaagga
gcgagagactatcttgttccaagcagagtcaatcctggaaaattttatgctttgcctcag
tctcctcagctttttaagcaattgctgatggtgtcaggaatgaacaggtacttccagatt
gtaagatgtttcagggatgaggacttaagagcaaacagacaacctgaatttactcaggta
gatattgaaatgtcttttgttgatgtagaggatgttatttcagttaatgaaaaactgata
caaagaatttttaaagaagtcaaaaatattgatatagaggtacctataaagcgcatgcca
tacaaggttgctatggataagtacggatgtgataagccggatttgcgctttggatatgag
cttacaaatataacaaagatttttagaaatacagagttcaatgcatttaagtccacatgt
gagtctaaagggctcattaagtgcattaaaatcgaaggagatgcagacgaattttcaaag
aaagggatatcaaagcttgaaaaattcgttaaaacatatggagctaaagggttagcgtgg
atgaaatatgaaggcggagcaattgactctccaatagcgaagttcctgagtgaagaagaa
atcaaacagctagaatcatctcttgaattaaaagagaaggatattgtatttattgtagct
gataaggaatccgtagtaaatactgcattaggggcattaagaattgagatagcaaagaaa
aaaggtcttatagacaacaataaatatgagttggtttggataacagactttccgcttttc
gaatttgatgaagaagaaaacagatacgttgcaaagcaccatccgtttacttcacctgta
gatgaagatattgagaagatagaatctgatccgggagaagtgagagcaaaagcatatgat
attgtaataaacggtgatgaaataggcggaggaagtatacgtataactaacagagagttg
caaaacagaatgtttagagcgttaggatttacagatgaggaagctaatgaaaagtttgga
tttttacttgaagcatttaagtacggagtaccaccacacggcggaattgcttacgggctg
gatcgcttcatgatgttgcttacagaaagtgataatatcagagacgttatagctttccct
aaaactcagagtgctacatgcctgatgacagaagcacctacgtatgcttccgaaaatcaa
cttaatgaattgagcatagaagtaaaagataaggaatag
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