Sedimentibacter sp. MB35-C1: RBQ61_11300
Help
Entry
RBQ61_11300 CDS
T10438
Name
(GenBank) bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm00900
Terpenoid backbone biosynthesis
sedm01100
Metabolic pathways
sedm01110
Biosynthesis of secondary metabolites
sedm03010
Ribosome
Module
sedm_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RBQ61_11300
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
RBQ61_11300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sedm03011
]
RBQ61_11300
Enzymes [BR:
sedm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
RBQ61_11300
Ribosome [BR:
sedm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
RBQ61_11300
Bacteria
RBQ61_11300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
Spt6_S1
S1_RRP5
PCB_OB
S1_2
B_lectin
Ribosomal_S8e
Motif
Other DBs
NCBI-ProteinID:
WMJ76211
LinkDB
All DBs
Position
complement(2369165..2371474)
Genome browser
AA seq
769 aa
AA seq
DB search
MKIEISKFNGFCSGVKIAVDKADKILDNEKKLYSYGEIIHNKYVVDKLKSKGLVVVDDIP
PSTDAKLLIRAHGVGKDIFDKMEENSLEVIDATCVKVKKIHKIVEEYKNNGYDIIITGDK
NHPEVLGILGWCKNEAYVIDKPEQLLNINISPDKKYCLVSQTTFNTDTFRKISDKIIENN
FSNIEIHNTICNATSKRQEACVELASRCNVMLIIGGKNSSNTKKLYELSKEVCHKTFLIE
NYKDIPYNYIDKNTIVGVSAGASAPDWIIEEVINMLENLNNNMNEQVEKKEQAEQTEQGT
MHDLLENYGGLSYIRTGEIVKGTVIYVSPDSISLNIKYKSDGIITKDEFSLAEVQDLTQV
VKEGDEIEAQVLKISDQDGNVVLTRRPLEERKIWEELEEMRSEGTEIETTIIEASQYGIY
GKVKGIKGFIPRNQISVTRNVDTSGYVGKVLKVQILETKNKKGRRQLVLTSRAVEKREKD
AREAEAWETIKEGEIYEGTVKNLQDYGAFVEINGIDGLLHINEIAWTRIKHPSDVLKTGD
KISVKVKNVDKENKRMSLSYKATIKSPWAIFLDKHQKGDVVTGKVTRIVDFGAFVEVDGI
ECLLHIKDLDWARTEKVTDVLQEGQEVTAKILNITRKDRKVGLGLKQLVEHPFDKYAKDL
KKDDIIPVEVTRILLDGIHVSANGNIDCFIPIAKVSNEKLRTPAQVVKVGEVKDAKVLGV
DMKGKNLNLTLILENKSDDFATEDASYKQEEANFTIGESIGSALEDLLK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgagatatcaaagtttaacggattttgctctggagttaaaatagctgttgac
aaagccgacaaaatacttgacaatgaaaaaaagctttacagctacggagaaataatacat
aataaatacgtcgtagacaaattgaaaagcaaaggcttagtagtagttgatgatattcca
ccaagtactgatgcaaaactattaatacgagcacatggtgtaggaaaagatattttcgat
aaaatggaagaaaatagcttagaagtcattgacgcaacttgtgtaaaagttaaaaaaata
cataaaatagttgaagaatacaaaaataacggttatgatataattataaccggagataaa
aaccatcctgaggttctgggtattctaggatggtgtaaaaatgaagcttacgtcatagat
aaacccgaacagcttttaaatataaatatttctccggataaaaaatactgtcttgtatca
cagacaacatttaacacagatacattcagaaaaatatcagataaaataatcgaaaataat
ttttcaaatattgaaattcataacacaatttgcaatgctacttctaaacgacaggaagca
tgtgttgaacttgcttctagatgtaatgtaatgttaataataggcggaaaaaatagttca
aatacaaaaaaattatatgaacttagcaaggaagtctgccataaaacattcttaattgaa
aattataaggatataccttataactatattgataaaaatactattgtgggagtgtccgca
ggagcatcagcacctgactggataattgaggaggttattaatatgttggaaaacctaaat
aacaacatgaatgaacaggttgaaaagaaagaacaggcagaacaaacagaacaaggtaca
atgcatgatttgcttgaaaattatggtggattatcttatatcagaacaggtgaaatagtt
aaaggtactgttatatatgtaagccctgattccatttcattaaacatcaaatataaatca
gacggaataattacaaaagatgaattttcccttgcagaagtacaagatttaactcaggtt
gtaaaagagggagatgaaatagaagctcaagtattaaaaatttctgaccaggatggaaat
gttgttttaactagaagacctcttgaagaacgaaagatttgggaagagctagaagaaatg
agatccgagggaacagaaatagagactactattattgaagcttctcaatacggaatttac
ggaaaggtaaaaggaattaaaggttttattccaagaaaccaaatttccgttacaaggaat
gtagatacttccggatacgtgggaaaagttcttaaggttcagatattagagactaagaat
aaaaaaggaagaagacagctggtcttaacatcaagagcagttgaaaaaagagaaaaagat
gcaagagaagctgaagcttgggaaactatcaaagaaggcgaaatatacgaaggaacagtt
aaaaatttacaggactacggcgcatttgttgaaataaatggaattgacggactccttcac
attaatgaaattgcttggacaaggataaaacatccttctgatgtattaaaaacaggcgat
aagataagtgtaaaagttaaaaatgtagataaagaaaacaaaagaatgtccttaagctac
aaagcaacaataaaaagtccttgggcgattttccttgataaacaccaaaaaggagatgta
gtaacaggtaaagttacaagaattgttgattttggtgcttttgttgaagtagatggaatt
gaatgcctgcttcatattaaagaccttgactgggcaagaactgaaaaagttacagatgta
ctgcaagaaggtcaggaagttacagctaagatattaaatataactagaaaagacagaaaa
gttggcctcggacttaagcaacttgttgaacatccttttgataaatatgctaaagacctt
aaaaaagatgatataattcctgtagaagttactcgtatactccttgacggaatccatgtc
agcgctaacggaaacatagactgctttatacctattgcgaaagtttcaaacgaaaaacta
agaactcccgctcaagtagtcaaagttggtgaagtaaaagacgcaaaagtgcttggcgta
gatatgaaaggtaaaaaccttaatctaacattaatactagaaaataaaagcgatgatttt
gcaactgaagatgcttcatacaagcaggaagaagcaaactttacaataggtgaatctata
gggtctgcacttgaagatttattaaaataa
DBGET
integrated database retrieval system
