Sedimentibacter sp. MB35-C1: RBQ61_13245
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Entry
RBQ61_13245 CDS
T10438
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
sedm Sedimentibacter sp. MB35-C1
Pathway
sedm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sedm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RBQ61_13245 (abc-f)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sedm02000
]
RBQ61_13245 (abc-f)
01504 Antimicrobial resistance genes [BR:
sedm01504
]
RBQ61_13245 (abc-f)
Transporters [BR:
sedm02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
RBQ61_13245 (abc-f)
Antimicrobial resistance genes [BR:
sedm01504
]
Gene variants
Macrolide resistance genes
Transporters
RBQ61_13245 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
Dynamin_N
AAA_15
RsgA_GTPase
MobB
Motif
Other DBs
NCBI-ProteinID:
WMJ76544
LinkDB
All DBs
Position
2742085..2743656
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AA seq
523 aa
AA seq
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MSLIQVNNLTFRYETNYKNIFENTTFEIDTDWKLGFIGRNGRGKTTLLKLLMGMYKYSGN
IEASVKFDYFPFEADVEQNTLETVRNIVAPFTYWEKEMDRCIREKSDSSIKRYGELLDLY
AHNDGYIINELIEKEIRKLYVDAEILSRKFDTLSSGEKTKVLIAALFLKKNNFLLIDEPT
NHLDLEGRNCVSEYLSQKRGFILVSHDRHFLDSSVDHILSINKCSIEIQKGNFSSWQENK
NRQDAYEINKNEKLKREIFNLEESFRRTSGWSDKVEASKIGEHAYDRGAIGHKAAKMMKR
AKSIERRKLKSLDEKKKLLNNIEQFDSLKVIPKSYHKDTLIYIDNLSISFNGRKVIENVG
FSVSQGDRIALRGKNGSGKSSILKVLLGKNDCYGGTVNIGSNLIISYVPQDTSFLKGSFQ
NFINDENINESVFRMLMSKFDMYSDDFSKNLEELSEGQKKKVLIAKSLSESAHIYVWDEP
LNFIDVYSRIQIQELIENFEPTMIFVEHDYSFNETISTKIVEL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaatacaagtaaacaatttgacattcagatatgaaacaaactataaaaatata
tttgaaaatacaacttttgaaattgatactgactggaaactcggattcataggaagaaac
ggcaggggaaaaactacgttgctaaaattgcttatgggtatgtataagtacagcggtaat
atagaggcttctgtaaagtttgattactttccttttgaagctgacgttgaacaaaatact
cttgaaaccgtaagaaatatagtagctcctttcacttactgggaaaaagaaatggaccga
tgtattcgcgaaaaatctgacagttcaattaaaagatacggagaactgttggatttatat
gcccataacgacggatacattatcaatgaattaattgaaaaggaaataaggaagctttat
gttgatgcggaaatcctctcacgtaaattcgataccctcagcagcggtgaaaaaacaaaa
gtcctgattgccgcactgtttctgaagaaaaacaattttctacttattgatgaacctaca
aatcatctggatttagaaggaagaaattgcgtttccgaatatctgagtcagaaaagagga
tttatattggtttcgcacgacagacatttccttgactcctcggttgatcacatactgtca
ataaacaaatgcagcatcgaaattcagaaaggaaatttttctagttggcaggaaaataaa
aataggcaggatgcttatgaaataaataaaaatgaaaagcttaaacgtgaaatttttaat
ctcgaggagtcattcaggagaacatccggatggagtgataaggtagaagcatctaaaata
ggagaacacgcctatgacagaggagccataggacacaaagcagcaaaaatgatgaaaagg
gcaaagtccattgaacggcgaaagcttaaatctcttgatgaaaagaaaaagcttctcaat
aatattgaacaatttgattcccttaaagtaattcccaagtcttatcataaggacactctt
atatatattgataatctaagtataagttttaacggcagaaaagtaattgagaatgtagga
ttttcagtaagtcaaggtgatagaattgctttaaggggcaagaacggttcaggaaaatca
agcatattaaaagtattgcttggtaagaatgattgctatggcggaaccgtcaatataggt
agcaacttgattatatcatatgttccgcaagacacgtcttttttgaaaggtagctttcaa
aatttcataaatgacgaaaatataaatgaaagtgtcttcagaatgttaatgtcaaaattt
gatatgtattcggatgatttctccaaaaatttagaggagttaagcgaaggtcagaaaaag
aaggtattaattgccaagagtctgtcagaaagtgctcatatatatgtttgggatgaaccg
ctgaactttatcgatgtatattctaggattcaaatacaagagcttatagaaaatttcgag
ccgacaatgatttttgtagaacacgattattctttcaatgaaactatatcaactaaaata
gtagaactttaa
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