Sedimenticola thiotaurini: AAY24_01855
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Entry
AAY24_01855 CDS
T03943
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
seds
Sedimenticola thiotaurini
Pathway
seds00300
Lysine biosynthesis
seds00470
D-Amino acid metabolism
seds01100
Metabolic pathways
seds01110
Biosynthesis of secondary metabolites
seds01120
Microbial metabolism in diverse environments
seds01230
Biosynthesis of amino acids
Module
seds_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
seds00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AAY24_01855
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AAY24_01855
Enzymes [BR:
seds01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AAY24_01855
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AKH19295
UniProt:
A0A0F7JWY9
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All DBs
Position
424836..426098
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AA seq
420 aa
AA seq
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MPISSDLEQRLYPNIEAIAQHFGTPFHIYDEKGIRETGETLNRLFAGIDGFKEYYAVKAL
PNPRILEIMRSLGFGFDCSSRAELQLSRATGARGEEIMFTSNNTSQADFQAAAADGGCVL
NLDDISLVDKVPEMPELICFRYNPGERRTGNSIIGTPVEAKYGVSHDQLLEAYRKAQARG
ARRFGLHTMLASNELNYSYMVETARMLLESVEWISSELGIRFEFVNIGGGLGIPYRPGEQ
PLDIAAMAHEITALFDDFRQRHGYAPRMYVESGRYITGPHGVLVTRAINRKEIYRTYVGV
DACMSALMRPGMYGAYHHITVPGKSGGDEVVDVAGSLCENNDKFAIQRNLPAISDGDLLC
IHDTGAHGHAMGFNYNGKVRPKELLLRSDGTVELIRREETLDDLFATLQFEPDNFTPARG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccatttccagcgatttagaacagcgtctctaccccaacatcgaagcgattgcccag
cacttcggtactccgttccacatctatgacgagaagggcatccgcgaaaccggcgagaca
ctgaaccggctgtttgccggtatcgacggtttcaaggagtactatgcggtgaaggcgttg
cccaatccccgcatcctggagatcatgcgctccctgggcttcggttttgactgcagttcc
agggcggagctccagctgagtcgtgccaccggcgcccggggtgaggagatcatgttcact
tccaacaacaccagccaggccgatttccaggcggccgcagccgatggtggctgtgtgctg
aatctggatgatatcagcctggtggacaaggtgccggagatgccggaactgatctgcttc
cgttacaatccgggtgaacggcgcaccggcaacagcattatcggcactccggtggaggcc
aagtatggcgtctcccacgatcagctgctggaggcctaccgcaaggcccaggcgcgcggg
gccaggcgttttggtctgcataccatgctggcctccaacgaactcaactacagctatatg
gtggagaccgcccgaatgctgctggagagtgtcgagtggatctccagcgagctgggcatc
cgcttcgagttcgttaatatcggcggcgggctgggcataccttaccgtcctggggagcag
cccctggatatcgccgcaatggcccatgagatcactgccctgtttgacgatttccggcag
cggcacggctatgcaccgcgtatgtatgtggagagcggccgttatatcaccggtccccat
ggtgtgctggtgacccgggcgatcaaccgcaaggagatctatcgcacctatgtgggggtg
gatgcctgtatgtcagccctgatgcgtcccggtatgtacggcgcttatcaccacattacc
gtgcccggtaaatcgggtggcgatgaggtggtggatgtggccggctcgctgtgtgagaac
aatgataaattcgccattcaacgtaacctgcccgctatcagcgatggggatctgctctgc
attcatgataccggtgcccacggccacgccatggggttcaactacaacggcaaggtgcgt
cctaaggagttgctgctgcgtagtgacggaacggttgagctgattcgtcgtgaagagacc
ctggatgatctgttcgctacgctgcagtttgaaccggacaatttcacccccgcccgggga
taa
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